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PLM2_30_b1_sep16_scaffold_1831

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_1831_1

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3..1064
DNA (1062bp) protein (354aa)
Aldo/keto reductase Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08P32_STIAD
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49270.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
aldo/keto reductase family protein
PLM2_30_b1_sep16_scaffold_1831_2

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1173..1727
DNA (555bp) protein (185aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CWK8_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49269.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM2_30_b1_sep16_scaffold_1831_3

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1810..2541
DNA (732bp) protein (244aa)
Uncharacterized protein Tax=Singulisphaera acidiphila RepID=L0DJ56_SINAD
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49268.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_1831_4

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2664..3563
DNA (900bp) protein (300aa)
Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKQ0_SINAD
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49267.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
PLM2_30_b1_sep16_scaffold_1831_5

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comp(3624..4268)
DNA (645bp) protein (215aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Methionine-R-sulfoxide reductase bin=GWA2_OP3_53_43 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
hypothetical protein
PLM2_30_b1_sep16_scaffold_1831_6

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4394..5023
DNA (630bp) protein (210aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase Tax=Chthoniobacter flavus Ellin428 RepID=B4CU06_9BACT
PLM2_30_b1_sep16_scaffold_1831_7

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comp(4984..7284)
DNA (2301bp) protein (767aa)
predicted hydrolase of metallo-beta-lactamase fold protein Tax=Verrucomicrobium spinosum RepID=UPI0001744361
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49252.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ComE-like competence protein
PLM2_30_b1_sep16_scaffold_1831_8
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

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7737..8993
DNA (1257bp) protein (419aa)
AAA ATPase central domain protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CUQ2_9BACT
putative ATPase
Tax=GWB2_Nitrospirae_47_37_curated
PLM2_30_b1_sep16_scaffold_1831_9
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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9004..9702
DNA (699bp) protein (233aa)
4-hydroxybenzoate polyprenyltransferase Tax=Chthoniobacter flavus Ellin428 RepID=B4CYX5_9BACT
4-hydroxybenzoate polyprenyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_30_b1_sep16_scaffold_1831_10
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(9862..10293)
DNA (432bp) protein (144aa)
Sugar-phosphate isomerase, RpiB/LacA/LacB family {ECO:0000313|EMBL:CCH54341.1}; EC=5.3.1.6 {ECO:0000313|EMBL:CCH54341.1};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Sugar-phosphate isomerase, RpiB/LacA/LacB family Tax=Fibrisoma limi BUZ 3 RepID=I2GKB6_9BACT
ribose 5-phosphate isomerase
PLM2_30_b1_sep16_scaffold_1831_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(10397..11353)
DNA (957bp) protein (319aa)
Chaperone DnaJ domain protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D3Q2_9BACT
Chaperone DnaJ domain protein {ECO:0000313|EMBL:EDY18882.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_1831_12
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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11472..11693
DNA (222bp) protein (74aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XNJ9_9BACT
hypothetical protein
Tax=RBG_16_Desulfobacca_58_9_curated
PLM2_30_b1_sep16_scaffold_1831_13
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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11869..12453
DNA (585bp) protein (195aa)
Uracil-DNA glycosylase superfamily bin=GWF2_OP3_43_52 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
uracil-DNA glycosylase superfamily protein
Tax=GWF2_WOR_2_43_52_curated
PLM2_30_b1_sep16_scaffold_1831_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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12502..14304
DNA (1803bp) protein (601aa)
peptidase (EC:3.4.24.-)
Oligoendopeptidase F Tax=Chthoniobacter flavus Ellin428 RepID=B4D0D3_9BACT
Oligoendopeptidase F {ECO:0000313|EMBL:EDY19795.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_1831_15
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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14338..15549
DNA (1212bp) protein (404aa)
beta-lactamase Tax=Verrucomicrobium spinosum RepID=UPI00017466C6
beta-lactamase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_30_b1_sep16_scaffold_1831_16
unknown

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15637..16074
DNA (438bp) protein (146aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_1831_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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16136..16381
DNA (246bp) protein (82aa)
molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE Tax=Verrucomicrobium spinosum RepID=UPI0001746B55
molybdopterin converting factor subunit 1
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM2_30_b1_sep16_scaffold_1831_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(16449..16934)
DNA (486bp) protein (162aa)
UPF0234 protein CfE428DRAFT_0350 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUI7_9BACT
UPF0234 protein CfE428DRAFT_0350 {ECO:0000256|HAMAP-Rule:MF_00632}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_1831_19
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16992..17687)
DNA (696bp) protein (232aa)
Uncharacterized protein {ECO:0000313|EMBL:KJE47796.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viridans.;"
Displaying 19 items

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