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PLM2_30_b1_sep16_scaffold_47

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_47_1
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

comp(2..514)
DNA (513bp) protein (171aa)
TIGR00300 family protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJC9_SINAD
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
PLM2_30_b1_sep16_scaffold_47_2
unknown

Not on your lists

795..1013
DNA (219bp) protein (73aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_47_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1001..1456
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D7N6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17526.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_47_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1497..2867
DNA (1371bp) protein (457aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D7N5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17525.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_47_5
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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2929..3513
DNA (585bp) protein (195aa)
GCN5-related N-acetyltransferase family protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YXL9_METPS
GCN5-related N-acetyltransferase family protein
GCN5-related N-acetyltransferase family protein {ECO:0000313|EMBL:BAI61191.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
PLM2_30_b1_sep16_scaffold_47_6
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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3517..4638
DNA (1122bp) protein (374aa)
S23 ribosomal protein bin=GWF2_Lentisphaerae_57_35 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
S23 ribosomal protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM2_30_b1_sep16_scaffold_47_7
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4669..5046)
DNA (378bp) protein (126aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003771C86
Uncharacterized protein {ECO:0000313|EMBL:EIM75761.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_47_8
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5157..6569)
DNA (1413bp) protein (471aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
fumarase (EC:4.2.1.2)
Fumarate hydratase class II Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QEX6_9FIRM
PLM2_30_b1_sep16_scaffold_47_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6566..7279)
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D3C8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19239.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
putative phospholipid N-methyltransferase
PLM2_30_b1_sep16_scaffold_47_trna_1
unknown

Not on your lists

7347..7418
DNA (72bp)
transferRNA Val
PLM2_30_b1_sep16_scaffold_47_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7449..8021
DNA (573bp) protein (191aa)
phosphoheptose isomerase (EC:5.3.1.-)
Phosphoheptose isomerase Tax=Chthoniobacter flavus Ellin428 RepID=B4CZP7_9BACT
Phosphoheptose isomerase {ECO:0000313|EMBL:EDY20211.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_47_11
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(8133..8984)
DNA (852bp) protein (284aa)
Uncharacterized protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWY5_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB75096.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM2_30_b1_sep16_scaffold_47_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

9127..10932
DNA (1806bp) protein (602aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Phosphoenolpyruvate carboxykinase [GTP] Tax=Pedosphaera parvula Ellin514 RepID=B9XIC7_9BACT
phosphoenolpyruvate carboxykinase
PLM2_30_b1_sep16_scaffold_47_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11045..16915
DNA (5871bp) protein (1957aa)
Excinuclease ABC, A subunit Tax=Chthoniobacter flavus Ellin428 RepID=B4D774_9BACT
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
excinuclease ABC subunit A
PLM2_30_b1_sep16_scaffold_47_14
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

17041..17976
DNA (936bp) protein (312aa)
prolipoprotein diacylglyceryl transferase Tax=Verrucomicrobium spinosum RepID=UPI0001746B96
prolipoprotein diacylglyceryl transferase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_30_b1_sep16_scaffold_47_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

18184..18939
DNA (756bp) protein (252aa)
MotA/TolQ/ExbB proton channel Tax=Chthoniobacter flavus Ellin428 RepID=B4D8P8_9BACT
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:EDY17270.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
MotA/TolQ/ExbB proton channel
PLM2_30_b1_sep16_scaffold_47_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

18936..19352
DNA (417bp) protein (139aa)
Biopolymer transport protein ExbD/TolR Tax=Chthoniobacter flavus Ellin428 RepID=B4D8P7_9BACT
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:EDY17269.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
biopolymertransporter ExbD/TolR
PLM2_30_b1_sep16_scaffold_47_17
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19349..20230
DNA (882bp) protein (294aa)
TonB family protein Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QJP9_DESB2
TonB family protein
TonB family protein {ECO:0000313|EMBL:ADK85792.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 /; 2st14).;"
PLM2_30_b1_sep16_scaffold_47_18
unknown

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comp(20445..20666)
DNA (222bp) protein (74aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_47_19
unknown

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comp(20904..21179)
DNA (276bp) protein (92aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_47_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

21573..23273
DNA (1701bp) protein (567aa)
D-aminoacylase Tax=uncultured Acidobacteria bacterium RepID=H5S9C8_9BACT
N-acyl-D-amino-acid deacylase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM2_30_b1_sep16_scaffold_47_21
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

23354..23842
DNA (489bp) protein (163aa)
Molecular chaperone (Small heat shock protein)-like protein Tax=Pedosphaera parvula Ellin514 RepID=B9XB80_9BACT
Molecular chaperone (Small heat shock protein)-like protein {ECO:0000313|EMBL:EEF62765.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
heat shock protein Hsp20
PLM2_30_b1_sep16_scaffold_47_22
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

23839..26283
DNA (2445bp) protein (815aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ATP-dependent protease La (EC:3.4.21.53)
Lon protease Tax=Pedosphaera parvula Ellin514 RepID=B9XB79_9BACT
PLM2_30_b1_sep16_scaffold_47_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(26316..26720)
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EK17_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KCZ71044.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_47_24
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26814..27452)
DNA (639bp) protein (213aa)
Putative uncharacterized protein ORF SG79 Tax=Pseudomonas aeruginosa RepID=Q8GPS3_PSEAI
Putative uncharacterized protein ORF SG79 {ECO:0000313|EMBL:AAN62301.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_47_25
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(27512..29566)
DNA (2055bp) protein (685aa)
ResB protein required for cytochrome c biosynthesis Tax=Methylacidiphilum fumariolicum SolV RepID=I0JXV5_9BACT
Cytochrome C biogenesis protein ResB {ECO:0000313|EMBL:KIE59068.1}; species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
resB; ResB protein required for cytochrome c biosynthesis
PLM2_30_b1_sep16_scaffold_47_26
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

29624..30442
DNA (819bp) protein (273aa)
Alpha/beta hydrolase fold protein Tax=Thiocapsa marina 5811 RepID=F9U951_9GAMM
alpha/beta hydrolase
Tax=RBG_13_OP3X_46_9_curated
PLM2_30_b1_sep16_scaffold_47_27
unknown

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comp(30786..31409)
DNA (624bp) protein (208aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_47_28
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(31440..31943)
DNA (504bp) protein (168aa)
Appr-1-p processing domain protein Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGM7_AMICL
Appr-1-p processing protein
Appr-1-p processing domain protein {ECO:0000313|EMBL:ADE57709.1}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
PLM2_30_b1_sep16_scaffold_47_29
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(32057..32707)
DNA (651bp) protein (217aa)
Pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XRU7_STAC7
Displaying items 1-30 of 41 in total

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