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PLM2_30_b1_sep16_scaffold_107

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_107_1
unknown

Not on your lists

comp(307..1122)
DNA (816bp) protein (272aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_107_2
unknown

Not on your lists

comp(1283..1570)
DNA (288bp) protein (96aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_107_3
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1675..2538
DNA (864bp) protein (288aa)
Uncharacterized protein Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SVS3_SYNGF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY55629.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
PLM2_30_b1_sep16_scaffold_107_4
unknown

Not on your lists

2641..2742
DNA (102bp) protein (34aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_107_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

2815..4407
DNA (1593bp) protein (531aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D638_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18241.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_107_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

5017..5802
DNA (786bp) protein (262aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D641_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18244.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_107_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

5813..6232
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PIH5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43062.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM2_30_b1_sep16_scaffold_107_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6349..7179)
DNA (831bp) protein (277aa)
Nucleotidyl transferase Tax=Chthoniobacter flavus Ellin428 RepID=B4D758_9BACT
Nucleotidyl transferase {ECO:0000313|EMBL:EDY17709.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
gcd1; nucleoside-diphosphate-sugar pyrophosphorylase
PLM2_30_b1_sep16_scaffold_107_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7154..9958)
DNA (2805bp) protein (935aa)
Bifunctional uridylyltransferase/uridylyl-removing enzyme Tax=Chthoniobacter flavus Ellin428 RepID=B4CU94_9BACT
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00049024}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glnD; UTP:GlnB (protein PII) uridylyltransferase
PLM2_30_b1_sep16_scaffold_107_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(10075..10605)
DNA (531bp) protein (177aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase Tax=Chthoniobacter flavus Ellin428 RepID=B4D3Q0_9BACT
PLM2_30_b1_sep16_scaffold_107_11
unknown

Not on your lists

comp(10687..11658)
DNA (972bp) protein (324aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_107_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11745..12539
DNA (795bp) protein (265aa)
Cytochrome c assembly protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D5X5_9BACT
Cytochrome c assembly protein {ECO:0000313|EMBL:EDY18178.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ccmC; ABC transporter permease
PLM2_30_b1_sep16_scaffold_107_13
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

12536..13606
DNA (1071bp) protein (357aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase Tax=Pedosphaera parvula Ellin514 RepID=B9XN62_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_30_b1_sep16_scaffold_107_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

13656..14615
DNA (960bp) protein (320aa)
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase Tax=Chthoniobacter flavus Ellin428 RepID=B4D5X7_9BACT
PLM2_30_b1_sep16_scaffold_107_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14608..16122
DNA (1515bp) protein (505aa)
Uroporphyrin-III C-methyltransferase Tax=Chthoniobacter flavus Ellin428 RepID=B4CUH6_9BACT
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:EDY22214.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
uroporphyrin-III C-methyltransferase
PLM2_30_b1_sep16_scaffold_107_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(16193..16390)
DNA (198bp) protein (66aa)
30S ribosomal protein S21 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUI2_9BACT
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
30S ribosomal protein S21
PLM2_30_b1_sep16_scaffold_107_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(16537..18924)
DNA (2388bp) protein (796aa)
Protein-export membrane protein SecD Tax=Chthoniobacter flavus Ellin428 RepID=B4D5U8_9BACT
Protein-export membrane protein SecD {ECO:0000313|EMBL:EDY18151.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
secD; preprotein translocase subunit SecD
PLM2_30_b1_sep16_scaffold_107_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(18953..19273)
DNA (321bp) protein (107aa)
Preprotein translocase, YajC subunit Tax=Chthoniobacter flavus Ellin428 RepID=B4D5U9_9BACT
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EDY18152.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
yajC; preprotein translocase subunit YajC
PLM2_30_b1_sep16_scaffold_107_trna_1
unknown

Not on your lists

19449..19521
DNA (73bp)
transferRNA Ala
PLM2_30_b1_sep16_scaffold_107_19
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(19607..20980)
DNA (1374bp) protein (458aa)
Putative uncharacterized protein Tax=Moorea producens 3L RepID=F4XY93_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGJ30490.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
PLM2_30_b1_sep16_scaffold_107_20
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(21055..22284)
DNA (1230bp) protein (410aa)
Glycosyl transferase, group 1 family protein Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VHA2_9CYAN
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EDX78423.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
group 1 glycosyl transferase
PLM2_30_b1_sep16_scaffold_107_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(22289..23104)
DNA (816bp) protein (272aa)
Glycosyl transferase family 2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5E9_9BACT
Glycosyl transferase family 2 {ECO:0000313|EMBL:EDY18354.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_107_22
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(23269..24120)
DNA (852bp) protein (284aa)
Uncharacterized protein Tax=Pleurocapsa sp. PCC 7327 RepID=K9T1B4_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY76233.1}; species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
PLM2_30_b1_sep16_scaffold_107_23
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24136..25080)
DNA (945bp) protein (315aa)
Putative uncharacterized protein Tax=Oscillatoria sp. PCC 6506 RepID=D8G5G1_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:CBN57851.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_107_24

Not on your lists

comp(25077..26306)
DNA (1230bp) protein (410aa)
Glycosyl transferase group 1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H9Q3_ANADF
Uncharacterized protein {ECO:0000313|EMBL:KKN92892.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
group 1 glycosyl transferase
PLM2_30_b1_sep16_scaffold_107_25
Enterococcus durans, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26303..27370)
DNA (1068bp) protein (356aa)
general stress protein A Tax=Enterococcus durans RepID=UPI0003286AB9
General stress protein A {ECO:0000313|EMBL:EMS75715.1}; species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus durans IPLA 655.;"
LPS:glycosyltransferase
PLM2_30_b1_sep16_scaffold_107_26
unknown

Not on your lists

comp(27387..28175)
DNA (789bp) protein (263aa)
hypothetical protein Tax=Burkholderia sp. JPY251 RepID=UPI000382C3FA
PLM2_30_b1_sep16_scaffold_107_27
Nodularia spumigena, Nodularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(28209..29384)
DNA (1176bp) protein (392aa)
Uncharacterized protein Tax=Nodularia spumigena RepID=A0ZN60_NODSP
Uncharacterized protein {ECO:0000313|EMBL:AHJ28655.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nodularia.;" source="Nodularia spumigena CCY9414.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_107_28
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(29407..30591)
DNA (1185bp) protein (395aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEK0_CHLTF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP11663.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM2_30_b1_sep16_scaffold_107_29
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30588..31850)
DNA (1263bp) protein (421aa)
Uncharacterized protein {ECO:0000313|EMBL:KHD08615.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
Displaying items 1-30 of 32 in total

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