ggKbase home page

PLM2_30_b1_sep16_scaffold_259

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_259_1
unknown

Not on your lists

comp(1..99)
DNA (99bp) protein (33aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_259_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

238..1419
DNA (1182bp) protein (394aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase Tax=Chthoniobacter flavus Ellin428 RepID=B4D0X3_9BACT
PLM2_30_b1_sep16_scaffold_259_3
unknown

Not on your lists

comp(1457..1882)
DNA (426bp) protein (142aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_259_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(2015..3118)
DNA (1104bp) protein (368aa)
Monogalactosyldiacylglycerol synthase Tax=Chthoniobacter flavus Ellin428 RepID=B4DCI7_9BACT
Monogalactosyldiacylglycerol synthase {ECO:0000313|EMBL:EDY15863.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
monogalactosyldiacylglycerol synthase
PLM2_30_b1_sep16_scaffold_259_5
Terribacillus aidingensis, Terribacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3362..4255
DNA (894bp) protein (298aa)
hypothetical protein Tax=Saccharibacillus kuerlensis RepID=UPI000379593C
ribonuclease
Ribonuclease {ECO:0000313|EMBL:AIF65823.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Terribacillus.;" source="Terribacillus aidingensis.;"
PLM2_30_b1_sep16_scaffold_259_6
unknown

Not on your lists

comp(5166..5570)
DNA (405bp) protein (135aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_259_7
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5756..7000)
DNA (1245bp) protein (415aa)
signal peptide protein Tax=Bradyrhizobium japonicum RepID=UPI00037210DF
Uncharacterized protein {ECO:0000313|EMBL:EJZ32868.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_259_8
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6997..8403)
DNA (1407bp) protein (469aa)
Amino acid permease-associated protein Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B5T2_9RHIZ
amino acid permease-associated protein
Amino acid permease-associated protein {ECO:0000313|EMBL:AGK57577.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
PLM2_30_b1_sep16_scaffold_259_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8492..8911
DNA (420bp) protein (140aa)
Amino acid-binding ACT domain protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D7P7_9BACT
Amino acid-binding ACT domain protein {ECO:0000313|EMBL:EDY17537.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Amino acid-binding ACT domain protein
PLM2_30_b1_sep16_scaffold_259_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9161..11335
DNA (2175bp) protein (725aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Glycogen debranching enzyme GlgX Tax=Chthoniobacter flavus Ellin428 RepID=B4D7P8_9BACT
glycogen debranching enzyme GlgX
PLM2_30_b1_sep16_scaffold_259_11
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

11504..12016
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E492_FLESM
hypothetical protein
Tax=BJP_IG2158_Nitrospirales_45_240
PLM2_30_b1_sep16_scaffold_259_12
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

12086..12451
DNA (366bp) protein (122aa)
Cold-shock DNA-binding domain protein Tax=Halothece sp. (strain PCC 7418) RepID=K9YID3_HALP7
cold-shock protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:AFZ45868.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain PCC 7418) (Synechococcus sp. (strain PCC 7418)).;"
PLM2_30_b1_sep16_scaffold_259_13
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12481..12921)
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YSE2_9CHLB
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
PLM2_30_b1_sep16_scaffold_259_14
gamma proteobacterium HIMB55, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13082..13456)
DNA (375bp) protein (125aa)
hypothetical protein Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002F048D1
Cupin domain-containing protein {ECO:0000313|EMBL:EHQ57756.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium HIMB55.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_259_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(13527..14093)
DNA (567bp) protein (189aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4DCA7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY15937.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_259_16
Alishewanella aestuarii, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14069..14545)
DNA (477bp) protein (159aa)
N-acetyltransferase GCN5 Tax=Alishewanella aestuarii B11 RepID=J1YB03_9ALTE
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EJI85005.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella aestuarii B11.;"
N-acetyltransferase GCN5
PLM2_30_b1_sep16_scaffold_259_17
Desulfovibrio alaskensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14568..15101)
DNA (534bp) protein (178aa)
Uncharacterized protein Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q30W38_DESDG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB40108.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans; (strain G20)).;"
PLM2_30_b1_sep16_scaffold_259_18
unknown

Not on your lists

comp(15113..15277)
DNA (165bp) protein (55aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_259_19
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(15281..16222)
DNA (942bp) protein (314aa)
Xylanase Tax=Pedosphaera parvula Ellin514 RepID=B9XKT8_9BACT
Xylanase {ECO:0000313|EMBL:EEF59581.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
xylanase
PLM2_30_b1_sep16_scaffold_259_20
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16335..16742)
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ES98_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KIF65937.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_259_21
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(16912..17316)
DNA (405bp) protein (135aa)
translational inhibitor protein Tax=Sphingomonas sp. KC8 RepID=UPI0002488A31
Uncharacterized protein {ECO:0000313|EMBL:KIJ75864.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
endoribonuclease L-PSP
PLM2_30_b1_sep16_scaffold_259_22
unknown

Not on your lists

comp(17400..17933)
DNA (534bp) protein (178aa)
hypothetical protein Tax=Methylocystis parvus RepID=UPI0002EE6320
PLM2_30_b1_sep16_scaffold_259_23
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18473..19567)
DNA (1095bp) protein (365aa)
Mg2+ transporter protein CorA family protein Tax=Lysobacter sp. ATCC 53042 RepID=F8TUC1_9GAMM
Magnesium transporter CorA {ECO:0000313|EMBL:EYR68254.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
Mg2+ transporter protein, CorA-like
PLM2_30_b1_sep16_scaffold_259_24
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19733..20059)
DNA (327bp) protein (109aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI00030DCE19
Membrane protein {ECO:0000313|EMBL:AKC86754.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
membrane protein
PLM2_30_b1_sep16_scaffold_259_25
unknown

Not on your lists

20133..20303
DNA (171bp) protein (57aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_259_26
unknown

Not on your lists

comp(20683..21009)
DNA (327bp) protein (109aa)
hypothetical protein Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00036F9ABC
Displaying 26 items

View Taxonomy