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PLM2_30_b1_sep16_scaffold_292

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_292_1
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..942
DNA (942bp) protein (314aa)
Abortive infection protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M8S2_GEODF
Abortive infection protein
Membrane metalloprotease, putative {ECO:0000313|EMBL:ACM20418.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM2_30_b1_sep16_scaffold_292_2

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1016..1969
DNA (954bp) protein (318aa)
Adenylate/guanylate cyclase Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VME7_9CYAN
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49186.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
adenylate/guanylate cyclase
PLM2_30_b1_sep16_scaffold_292_3
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2127..2612
DNA (486bp) protein (162aa)
Uncharacterized protein Tax=Pseudomonas sp. EGD-AK9 RepID=U2A2Q9_9PSED
Shikimate kinase {ECO:0000313|EMBL:KIH77292.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_292_4
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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2729..3460
DNA (732bp) protein (244aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_50_93 species=Prevotella oralis genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Tax=GWF2_Lentisphaerae_50_93_curated
PLM2_30_b1_sep16_scaffold_292_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3488..3961
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XM30_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59158.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM2_30_b1_sep16_scaffold_292_6
RLO_PLX_64_10, Bacteria

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4057..4434
DNA (378bp) protein (126aa)
Putative uncharacterized protein Tax=uncultured bacterium RepID=E4WMD2_9BACT
glyoxalase/bleomycin resistance protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM2_30_b1_sep16_scaffold_292_7
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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4489..5157
DNA (669bp) protein (223aa)
Alpha/beta hydrolase Tax=Mycobacterium rhodesiae JS60 RepID=G4I8P2_MYCRH
Alpha/beta hydrolase {ECO:0000313|EMBL:KIF37710.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
alpha/beta hydrolase
PLM2_30_b1_sep16_scaffold_292_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(5342..8344)
DNA (3003bp) protein (1001aa)
Protein translocase subunit SecA Tax=Chthoniobacter flavus Ellin428 RepID=B4D6C4_9BACT
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
secA; preprotein translocase subunit SecA (ATPase, RNA helicase)
PLM2_30_b1_sep16_scaffold_292_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(8611..9180)
DNA (570bp) protein (190aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase Tax=Chthoniobacter flavus Ellin428 RepID=B4DCH9_9BACT
PLM2_30_b1_sep16_scaffold_292_10
unknown

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9320..9508
DNA (189bp) protein (63aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_292_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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9520..11139
DNA (1620bp) protein (540aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
GMP synthase [glutamine-hydrolyzing] Tax=Chthoniobacter flavus Ellin428 RepID=B4DCH7_9BACT
guaA; GMP synthase
PLM2_30_b1_sep16_scaffold_292_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(11182..12711)
DNA (1530bp) protein (510aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D761_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17712.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
proteasome component
PLM2_30_b1_sep16_scaffold_292_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(12802..14487)
DNA (1686bp) protein (562aa)
AAA ATPase central domain protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CWP4_9BACT
AAA ATPase central domain protein {ECO:0000313|EMBL:EDY21836.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
spoVK; Proteasome-activating AAA-ATPase
PLM2_30_b1_sep16_scaffold_292_14
unknown

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14575..14871
DNA (297bp) protein (99aa)
Zn-dependent hydrolase of the beta-lactamase fold (Modular protein) Tax=Methylacidiphilum fumariolicum SolV RepID=I0JXP7_9BACT
PLM2_30_b1_sep16_scaffold_292_trna_1
unknown

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14752..14825
DNA (74bp)
transferRNA Asp
PLM2_30_b1_sep16_scaffold_292_15
unknown

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comp(15227..15400)
DNA (174bp) protein (58aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_292_16
unknown

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15528..15683
DNA (156bp) protein (52aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_292_17
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15744..16202
DNA (459bp) protein (153aa)
Uncharacterized protein Tax=Pseudomonas synxantha BG33R RepID=I4KW97_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EIK68987.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
NAD-dependent DNA ligase
PLM2_30_b1_sep16_scaffold_292_18
unknown

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16835..17362
DNA (528bp) protein (176aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_292_19
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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17442..17711
DNA (270bp) protein (90aa)
Uncharacterized protein {ECO:0000313|EMBL:AHM60486.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
PLM2_30_b1_sep16_scaffold_292_20
unknown

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comp(17935..18345)
DNA (411bp) protein (137aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_292_21
unknown

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comp(18371..18934)
DNA (564bp) protein (188aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_292_22
unknown

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comp(18998..19153)
DNA (156bp) protein (52aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_292_23
unknown

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19685..19894
DNA (210bp) protein (70aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_292_24
unknown

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20159..20440
DNA (282bp) protein (94aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_292_25
Leptospira kirschneri, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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20504..21271
DNA (768bp) protein (256aa)
Leucine-rich repeat containing protein Tax=Microscilla marina ATCC 23134 RepID=A1ZC38_9BACT bin=ACD39 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
Leucine rich repeat protein {ECO:0000313|EMBL:EMN27360.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira kirschneri serovar Sokoine str. RM1.;"
leucine rich repeat domain-containing protein
PLM2_30_b1_sep16_scaffold_292_26
unknown

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21338..21604
DNA (267bp) protein (89aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_292_27
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(22147..22818)
DNA (672bp) protein (224aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MJT7_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE07404.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
PLM2_30_b1_sep16_scaffold_292_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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23131..23340
DNA (210bp) protein (70aa)
Cold-shock DNA-binding domain protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cold-shock DNA-binding domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM2_30_b1_sep16_scaffold_292_29
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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comp(23434..24357)
DNA (924bp) protein (308aa)
id=4436700 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Tax=GWF2_Lentisphaerae_49_21_curated
Displaying items 1-30 of 43 in total

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