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PLM2_30_b1_sep16_scaffold_339

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_339_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1..282
DNA (282bp) protein (94aa)
Type II secretion system protein E Tax=Chthoniobacter flavus Ellin428 RepID=B4D852_9BACT
Type II secretion system protein E {ECO:0000313|EMBL:EDY17406.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
general secretory pathway protein E
PLM2_30_b1_sep16_scaffold_339_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(305..952)
DNA (648bp) protein (216aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase Tax=Chthoniobacter flavus Ellin428 RepID=B4CZD9_9BACT
PLM2_30_b1_sep16_scaffold_339_3
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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1179..2216
DNA (1038bp) protein (346aa)
rod shape-determining protein Mbl Tax=Verrucomicrobium spinosum RepID=UPI0001746B3C
mreB; rod shape-determining protein MreB
Tax=GWF2_Lentisphaerae_57_35_curated
PLM2_30_b1_sep16_scaffold_339_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2322..3125
DNA (804bp) protein (268aa)
Cell shape-determining protein MreC Tax=Chthoniobacter flavus Ellin428 RepID=B4D4U1_9BACT
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rod shape-determining protein MreC
PLM2_30_b1_sep16_scaffold_339_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3122..3664
DNA (543bp) protein (181aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D4U2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18545.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_339_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3661..5928
DNA (2268bp) protein (756aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Penicillin-binding protein 2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4U3_9BACT
ftsI; Cell division protein FtsI
PLM2_30_b1_sep16_scaffold_339_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6010..7584
DNA (1575bp) protein (525aa)
Ribonuclease, Rne/Rng family Tax=Chthoniobacter flavus Ellin428 RepID=B4D4U4_9BACT
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:EDY18547.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ribonuclease, Rne/Rng family
PLM2_30_b1_sep16_scaffold_339_8
unknown

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7721..8443
DNA (723bp) protein (241aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_339_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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8616..9749
DNA (1134bp) protein (378aa)
Thiazole biosynthesis protein ThiH Tax=Chthoniobacter flavus Ellin428 RepID=B4CWW4_9BACT
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:EDY21284.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
thiH; thiamine biosynthesis enzyme ThiH
PLM2_30_b1_sep16_scaffold_339_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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9798..9998
DNA (201bp) protein (67aa)
Thiamine biosynthesis protein ThiS Tax=Chthoniobacter flavus Ellin428 RepID=B4CWW3_9BACT
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EDY21283.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
thiamine biosynthesis protein ThiS
PLM2_30_b1_sep16_scaffold_339_11
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(10307..11731)
DNA (1425bp) protein (475aa)
Membrane-bound serine protease, NfeD family bin=GWF2_Lentisphaerae_57_35 species=Methylacidiphilum fumariolicum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
nfeD; membrane-bound serine protease, NfeD family
Tax=GWF2_Lentisphaerae_57_35_curated
PLM2_30_b1_sep16_scaffold_339_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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11786..13657
DNA (1872bp) protein (624aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA primase Tax=Chthoniobacter flavus Ellin428 RepID=B4CWV5_9BACT
DNA primase
PLM2_30_b1_sep16_scaffold_339_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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13785..15563
DNA (1779bp) protein (593aa)
RNA polymerase sigma factor SigA Tax=Chthoniobacter flavus Ellin428 RepID=B4CWV6_9BACT
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
RpoD family RNA polymerase sigma-70 subunit
PLM2_30_b1_sep16_scaffold_339_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

15630..15983
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D736_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17687.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_339_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

16072..16494
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D737_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17688.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_339_16
Pseudomonas sp. GM55, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16592..16822)
DNA (231bp) protein (77aa)
Uncharacterized protein Tax=Pseudomonas sp. GM55 RepID=J3GRC1_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJM72607.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM55.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_339_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(16874..17950)
DNA (1077bp) protein (359aa)
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD Tax=Chthoniobacter flavus Ellin428 RepID=B4D449_9BACT
Riboflavin biosynthesis protein RibD {ECO:0000313|EMBL:EDY18650.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_339_trna_2
unknown

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comp(17975..18048)
DNA (74bp)
transferRNA Arg
PLM2_30_b1_sep16_scaffold_339_trna_1
unknown

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comp(18136..18207)
DNA (72bp)
transferRNA His
PLM2_30_b1_sep16_scaffold_339_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

18335..19675
DNA (1341bp) protein (447aa)
Tetratricopeptide TPR_2 repeat protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CUH3_9BACT
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EDY22211.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
Displaying 20 items

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