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PLM2_30_b1_sep16_scaffold_489

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_489_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3..485)
DNA (483bp) protein (161aa)
Secretion protein HlyD family protein Tax=Pedosphaera parvula Ellin514 RepID=B9XI48_9BACT
Secretion protein HlyD family protein {ECO:0000313|EMBL:EEF60541.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
acriflavin resistance AcrA/AcrE family protein
PLM2_30_b1_sep16_scaffold_489_2
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(569..1195)
DNA (627bp) protein (209aa)
Transcriptional regulator Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CA51_DESTA
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AFM26442.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
PLM2_30_b1_sep16_scaffold_489_3
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

1354..1761
DNA (408bp) protein (136aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Opitutaceae bacterium TAV5 RepID=H1IQZ7_9BACT
glyoxalase
Glyoxalase {ECO:0000313|EMBL:AHF90444.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
PLM2_30_b1_sep16_scaffold_489_4
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(1780..3090)
DNA (1311bp) protein (437aa)
Uncharacterized protein Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R1J6_ISOPI
Uncharacterized protein {ECO:0000313|EMBL:GAN32785.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_489_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3087..4565)
DNA (1479bp) protein (493aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A Tax=Chthoniobacter flavus Ellin428 RepID=B4D3C4_9BACT
PLM2_30_b1_sep16_scaffold_489_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4562..4852)
DNA (291bp) protein (97aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
gatC; glutamyl-tRNA amidotransferase subunit C (EC:6.3.5.6 6.3.5.7)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C Tax=Chthoniobacter flavus Ellin428 RepID=B4D3C3_9BACT
PLM2_30_b1_sep16_scaffold_489_7
unknown

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comp(4862..5221)
DNA (360bp) protein (120aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_489_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5221..5841)
DNA (621bp) protein (207aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D3C1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19232.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_489_9
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(5965..7131)
DNA (1167bp) protein (389aa)
SAM-dependent methyltransferase Tax=Verrucomicrobium spinosum RepID=UPI0001745B1A
SAM-dependent methyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_30_b1_sep16_scaffold_489_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7230..8123
DNA (894bp) protein (298aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase Tax=Chthoniobacter flavus Ellin428 RepID=B4D121_9BACT
PLM2_30_b1_sep16_scaffold_489_11
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

Not on your lists

8241..9776
DNA (1536bp) protein (512aa)
hypothetical protein, partial Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI000368CBF1
choline-sulfatase
Tax=GWC2_Clostridiales_40_7_curated
PLM2_30_b1_sep16_scaffold_489_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9778..10515
DNA (738bp) protein (246aa)
Methyltransferase type 12 Tax=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) RepID=A1U3Z4_MARAV
type 12 methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM2_30_b1_sep16_scaffold_489_13
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10533..11285
DNA (753bp) protein (251aa)
Uncharacterized protein Tax=Pseudomonas alcaligenes OT 69 RepID=U3H8D3_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:EQM68743.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes OT 69.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_489_14
Leptotrichia sp. oral taxon 879, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(11428..13164)
DNA (1737bp) protein (579aa)
Acyltransferase Tax=Leptotrichia sp. oral taxon 879 str. F0557 RepID=U2REW1_9FUSO
Acyltransferase {ECO:0000313|EMBL:ERK52098.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 879 str. F0557.;"
PLM2_30_b1_sep16_scaffold_489_15
unknown

Not on your lists

comp(13264..13584)
DNA (321bp) protein (107aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_489_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13665..14735)
DNA (1071bp) protein (357aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Malate dehydrogenase Tax=Pedosphaera parvula Ellin514 RepID=B9XQ90_9BACT
malate dehydrogenase
PLM2_30_b1_sep16_scaffold_489_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14804..15259
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CWN9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21831.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Fe-S metabolism associated SufE
PLM2_30_b1_sep16_scaffold_489_18
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15371..16537
DNA (1167bp) protein (389aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
Carbamoyl-phosphate synthase large chain Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2URJ1_AKKM8
carbamoyl-phosphate synthase large subunit
Displaying 18 items

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