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PLM2_30_b1_sep16_scaffold_492

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_492_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2..613
DNA (612bp) protein (204aa)
Cyclase/dehydrase Tax=Chthoniobacter flavus Ellin428 RepID=B4CY62_9BACT
Cyclase/dehydrase {ECO:0000313|EMBL:EDY21210.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cyclase/dehydrase
PLM2_30_b1_sep16_scaffold_492_2
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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679..2814
DNA (2136bp) protein (712aa)
prolyl endopeptidase (EC:3.4.21.26)
Prolyl endopeptidase {ECO:0000313|EMBL:AGY59968.1}; EC=3.4.21.26 {ECO:0000313|EMBL:AGY59968.1};; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
Prolyl endopeptidase Tax=Gloeobacter kilaueensis JS1 RepID=U5QM69_9CYAN
PLM2_30_b1_sep16_scaffold_492_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2901..4232
DNA (1332bp) protein (444aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D164_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20076.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_492_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(4310..5569)
DNA (1260bp) protein (420aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PAS/PAC sensor signal transduction histidine kinase Tax=Chthoniobacter flavus Ellin428 RepID=B4DCS0_9BACT
ntrB; Signal transduction histidine kinase with PAS domain
PLM2_30_b1_sep16_scaffold_492_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(5648..6652)
DNA (1005bp) protein (335aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XNV3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58526.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_492_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6799..7380
DNA (582bp) protein (194aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase Tax=Chthoniobacter flavus Ellin428 RepID=B4DB52_9BACT
ubiX; 3-polyprenyl-4-hydroxybenzoate decarboxylase
PLM2_30_b1_sep16_scaffold_492_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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7377..8021
DNA (645bp) protein (215aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4DB51_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY16329.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_492_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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8161..9039
DNA (879bp) protein (293aa)
Methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase Tax=Verrucomicrobium spinosum RepID=UPI0001745AEA
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_492_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(9034..10113)
DNA (1080bp) protein (360aa)
Geranylgeranyl reductase Tax=Chthoniobacter flavus Ellin428 RepID=B4CVZ2_9BACT
Geranylgeranyl reductase {ECO:0000313|EMBL:EDY21584.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
putative oxidoreductase
PLM2_30_b1_sep16_scaffold_492_10
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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10264..11349
DNA (1086bp) protein (362aa)
Peptidase M50 family protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I780_CALAS
peptidase M50 family protein
Peptidase M50 family protein {ECO:0000313|EMBL:BAM01118.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM2_30_b1_sep16_scaffold_492_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(11356..12453)
DNA (1098bp) protein (366aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
DNA polymerase III subunit beta (EC:2.7.7.7)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-M04 RepID=UPI00035C85B2
PLM2_30_b1_sep16_scaffold_492_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(12584..13945)
DNA (1362bp) protein (454aa)
Chromosomal replication initiator protein DnaA Tax=Chthoniobacter flavus Ellin428 RepID=B4D051_9BACT
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
chromosomal replication initiator protein DnaA
PLM2_30_b1_sep16_scaffold_492_13
unknown

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comp(13965..14192)
DNA (228bp) protein (76aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_492_14
unknown

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14562..15152
DNA (591bp) protein (197aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_492_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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15273..16979
DNA (1707bp) protein (569aa)
plasma-membrane proton-efflux P-type ATPase (EC:3.6.3.6)
Plasma-membrane proton-efflux P-type ATPase {ECO:0000313|EMBL:ACX95809.1}; EC=3.6.3.6 {ECO:0000313|EMBL:ACX95809.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Plasma-membrane proton-efflux P-type ATPase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZD6_HALNC
Displaying 15 items

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