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PLM2_30_b1_sep16_scaffold_785

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_785_1
unknown

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comp(3..185)
DNA (183bp) protein (61aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_785_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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283..672
DNA (390bp) protein (130aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC Tax=Chthoniobacter flavus Ellin428 RepID=B4CVP7_9BACT
PLM2_30_b1_sep16_scaffold_785_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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669..1250
DNA (582bp) protein (194aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Octanoyltransferase Tax=Chthoniobacter flavus Ellin428 RepID=B4D675_9BACT
lipoate-protein ligase B
PLM2_30_b1_sep16_scaffold_785_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1274..2092
DNA (819bp) protein (273aa)
Beta-lactamase domain protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D0D6_9BACT
Beta-lactamase domain protein {ECO:0000313|EMBL:EDY19798.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
gloB; Zn-dependent hydrolase, glyoxylase family
PLM2_30_b1_sep16_scaffold_785_5
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2132..2518
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Rhodopirellula sallentina SM41 RepID=M5U7R7_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EMI57512.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_785_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2515..3411
DNA (897bp) protein (299aa)
6-phosphogluconate dehydrogenase NAD-binding Tax=Pedosphaera parvula Ellin514 RepID=B9XQ05_9BACT
6-phosphogluconate dehydrogenase NAD-binding {ECO:0000313|EMBL:EEF58102.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
2-hydroxy-3-oxopropionate reductase
PLM2_30_b1_sep16_scaffold_785_7
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3457..5682)
DNA (2226bp) protein (742aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000363548B
Uncharacterized protein {ECO:0000313|EMBL:ETT24125.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
BNR repeat-containing glycosyl hydrolase
PLM2_30_b1_sep16_scaffold_785_8

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comp(5714..8176)
DNA (2463bp) protein (821aa)
hypothetical protein Tax=Dyella japonica RepID=UPI0002F34B69
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49190.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_785_9

Not on your lists

comp(8590..11025)
DNA (2436bp) protein (812aa)
hypothetical protein Tax=Dyella japonica RepID=UPI0002F597DA
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49067.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_785_10
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(11101..12039)
DNA (939bp) protein (313aa)
HTTM domain protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L3F1_HALH1
HTTM domain-containing protein
HTTM domain protein {ECO:0000313|EMBL:AEE52928.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
PLM2_30_b1_sep16_scaffold_785_11
unknown

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comp(12036..12764)
DNA (729bp) protein (243aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_785_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(13255..13614)
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D0F2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19814.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_785_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(13749..14645)
DNA (897bp) protein (299aa)
RNA polymerase, sigma 54 subunit, RpoN Tax=Chthoniobacter flavus Ellin428 RepID=B4D101_9BACT
RNA polymerase, sigma 54 subunit, RpoN {ECO:0000313|EMBL:EDY20013.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
RNA polymerase sigma 54 subunit RpoN
PLM2_30_b1_sep16_scaffold_785_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(14633..15172)
DNA (540bp) protein (180aa)
RNA polymerase, sigma 54 subunit, RpoN Tax=Chthoniobacter flavus Ellin428 RepID=B4D101_9BACT
RNA polymerase, sigma 54 subunit, RpoN {ECO:0000313|EMBL:EDY20013.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
RNA polymerase sigma 54 subunit RpoN
PLM2_30_b1_sep16_scaffold_785_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(15278..16558)
DNA (1281bp) protein (427aa)
trzA; chlorohydrolase (EC:3.8.1.-)
Amidohydrolase Tax=Chthoniobacter flavus Ellin428 RepID=B4D0Z5_9BACT
Amidohydrolase {ECO:0000313|EMBL:EDY20007.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_785_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(16555..17214)
DNA (660bp) protein (220aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D0Z4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20006.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Hypothetical Protein
PLM2_30_b1_sep16_scaffold_785_17
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(17232..17690)
DNA (459bp) protein (153aa)
Putative GAF sensor protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHP1_THET1
GAF sensor protein
Tax=RBG_16_Chloroflexi_68_14_curated
PLM2_30_b1_sep16_scaffold_785_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(17739..17870)
DNA (132bp) protein (44aa)
Cobalamin (Vitamin B12) biosynthesis CbiX protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D0Z3_9BACT
Cobalamin (Vitamin B12) biosynthesis CbiX protein {ECO:0000313|EMBL:EDY20005.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Displaying 18 items

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