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PLM2_30_b1_sep16_scaffold_2871

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_2871_1
unknown

Not on your lists

comp(2..148)
DNA (147bp) protein (49aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_2871_2
CSP1_5_NC10, NC10, Bacteria

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comp(196..1242)
DNA (1047bp) protein (349aa)
group 1 glycosyl transferase bin=bin3_NC10 species=unknown genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
group 1 glycosyl transferase
Tax=CSP1_5_NC10
PLM2_30_b1_sep16_scaffold_2871_3
unknown

Not on your lists

comp(1586..1864)
DNA (279bp) protein (93aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_2871_4
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(1888..2802)
DNA (915bp) protein (305aa)
ribonuclease BN Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002484CCC
ribonuclease BN
Putative ribonuclease BN {ECO:0000313|EMBL:ABX06555.1}; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
PLM2_30_b1_sep16_scaffold_2871_5
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

2835..3869
DNA (1035bp) protein (345aa)
ATP dependent DNA ligase Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A077_OPITP
ligC; ATP-dependent DNA ligase
ATP dependent DNA ligase {ECO:0000313|EMBL:ACB77413.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM2_30_b1_sep16_scaffold_2871_6
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4570..5247)
DNA (678bp) protein (226aa)
DNA topoisomerase IB (poxvirus type) (EC:5.99.1.2)
DNA topoisomerase IB (Poxvirus type) {ECO:0000313|EMBL:AIQ88693.1}; EC=5.99.1.2 {ECO:0000313|EMBL:AIQ88693.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
hypothetical protein Tax=Massilia niastensis RepID=UPI00036B6CC9
PLM2_30_b1_sep16_scaffold_2871_7
unknown

Not on your lists

5393..5638
DNA (246bp) protein (82aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_2871_8
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5648..6130)
DNA (483bp) protein (161aa)
hypothetical protein Tax=Gemmata obscuriglobus RepID=UPI00016C51EE
hypothetical protein
Tax=GWB2_Geobacteraceae_52_12_curated
PLM2_30_b1_sep16_scaffold_2871_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6155..7663)
DNA (1509bp) protein (503aa)
FAD dependent oxidoreductase Tax=Chthoniobacter flavus Ellin428 RepID=B4D2T2_9BACT
FAD dependent oxidoreductase {ECO:0000313|EMBL:EDY19043.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
rieske family iron-sulfur cluster-binding protein
PLM2_30_b1_sep16_scaffold_2871_10
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

8025..8171
DNA (147bp) protein (49aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EIC2_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_51_16_curated
PLM2_30_b1_sep16_scaffold_2871_11
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8347..8793
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Candidatus Burkholderia kirkii UZHbot1 RepID=G4M2B5_9BURK
Aldehyde dehydrogenase {ECO:0000313|EMBL:KDR44572.1}; Uncharacterized protein {ECO:0000313|EMBL:CDY73943.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_2871_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9121..9567
DNA (447bp) protein (149aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INJ2_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41558.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM2_30_b1_sep16_scaffold_2871_13
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

9602..10462
DNA (861bp) protein (287aa)
Short-chain dehydrogenase/reductase SDR Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TU57_9CYAN
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AFY86095.1}; species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
PLM2_30_b1_sep16_scaffold_2871_14
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10817..11047)
DNA (231bp) protein (77aa)
Uncharacterized protein Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EMX4_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCV05687.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
PLM2_30_b1_sep16_scaffold_2871_15
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

11174..11683
DNA (510bp) protein (170aa)
Putative membrane protein Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A2K6_DEIPD
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFZ67432.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
PLM2_30_b1_sep16_scaffold_2871_trna_1
unknown

Not on your lists

11820..11901
DNA (82bp)
transferRNA Leu
PLM2_30_b1_sep16_scaffold_2871_16
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12108..13208
DNA (1101bp) protein (367aa)
Multi-sensor hybrid histidine kinase Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YWZ6_DESAF
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EGJ49384.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
PLM2_30_b1_sep16_scaffold_2871_17

Not on your lists

13153..14508
DNA (1356bp) protein (452aa)
Multi-sensor Signal Transduction Histidine Kinase Tax=Verrucomicrobium spinosum RepID=UPI0001745B4E
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase {ECO:0000313|EMBL:AIA15050.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PAS/PAC sensor signal transduction histidine kinase
PLM2_30_b1_sep16_scaffold_2871_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14505..15152
DNA (648bp) protein (216aa)
Two component transcriptional regulator, LuxR family Tax=Chthoniobacter flavus Ellin428 RepID=B4D664_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EDY17973.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
LuxR family transcriptional regulator
PLM2_30_b1_sep16_scaffold_2871_19

Not on your lists

15239..15568
DNA (330bp) protein (110aa)
Two-component response regulator, LuxR/FixJ family Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZDX0_AZOL4
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49356.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Two-component response regulator, LuxR/FixJ family
PLM2_30_b1_sep16_scaffold_2871_20
unknown

Not on your lists

15565..15939
DNA (375bp) protein (125aa)

This feature has no annotations

Displaying 21 items

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