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PLM2_30_b1_sep16_scaffold_1118_8

Organism: PLM2_30_b1_sep16_Chthoniobacter_flavus_55_21

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 ASCG 12 / 38
Location: comp(5546..6091)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 175.0
  • Bit_score: 173
  • Evalue 2.10e-40
2'-5' RNA ligase Tax=Chthoniobacter flavus Ellin428 RepID=B4D614_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 175.0
  • Bit_score: 173
  • Evalue 1.50e-40
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 169.0
  • Bit_score: 149
  • Evalue 5.10e-34

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 546
ATGCCCAAGCGTCTCTTTGTTGCGATCGATCTGCCGGACTCAACGCGCCATTTGCTTGCAGATCTTGATCCGCAAATTAGCGGCGTGCGCTGGGTCGACCCGGCTCAGATGCACTTGACGCTCGGTTTTTTCGATGATGTGCCAGACGATGTCGATTCTGCGCTGCGCGAAAAACTCAGCGGGATCGACTTTGGCGCATTCTTTCTACCTGTTCGCGGTGTCGGAACATTTTCCACAAAAGGAGCTCTGAAAATCATTTGGATTGGCGTTGGCAAGGCGCACCCGCATCTGTTTCAAATTCACAAACGCGTCCAGGAAGCCGCGCTCGCCGCTGGGTTGGAGCCGGAGCTGCGCCCCTGGCATCCACACATTACTATTGCGCGCTGCCGCGATGTCGCACCACATTCGCTGCGAAATTTTTTGAAATCGAATCGCGATTTCGATGCAGGAATGATCCGCGTCGGCGCTTTCCATCTTTATTCCAGCAAACTAACTCCCGCCGGTCCGATTCATACACGCGAGGTCAGCGTGCGTTGCCGCGAATAA
PROTEIN sequence
Length: 182
MPKRLFVAIDLPDSTRHLLADLDPQISGVRWVDPAQMHLTLGFFDDVPDDVDSALREKLSGIDFGAFFLPVRGVGTFSTKGALKIIWIGVGKAHPHLFQIHKRVQEAALAAGLEPELRPWHPHITIARCRDVAPHSLRNFLKSNRDFDAGMIRVGAFHLYSSKLTPAGPIHTREVSVRCRE*