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PLM2_30_b1_sep16_scaffold_1118

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_1118_1
unknown

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comp(1..198)
DNA (198bp) protein (66aa)

This feature has no annotations

PLM2_30_b1_sep16_scaffold_1118_2
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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281..997
DNA (717bp) protein (239aa)
hypothetical protein Tax=Pontibacter roseus RepID=UPI00037E5DAC
Carbonic anhydrase {ECO:0000313|EMBL:AHM60565.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
carbonic anhydrase
PLM2_30_b1_sep16_scaffold_1118_3
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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1186..1761
DNA (576bp) protein (192aa)
SnoaL-like polyketide cyclase Tax=Synechocystis sp. PCC 7509 RepID=L8KSI4_9SYNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ10742.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 7112.;"
PLM2_30_b1_sep16_scaffold_1118_4
Chamaesiphon minutus, Chamaesiphon, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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1806..2204
DNA (399bp) protein (133aa)
Truncated hemoglobin Tax=Chamaesiphon minutus PCC 6605 RepID=K9UL54_9CHRO
truncated hemoglobin
Truncated hemoglobin {ECO:0000313|EMBL:AFY94924.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Chamaesiphon.;" source="Chamaesiphon minutus PCC 6605.;"
PLM2_30_b1_sep16_scaffold_1118_5

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2211..2996
DNA (786bp) protein (262aa)
hypothetical protein Tax=Nodosilinea nodulosa RepID=UPI0002EFAD3E
Putative uncharacterized protein {ECO:0000313|EMBL:CBI71175.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative Fe-S protein
PLM2_30_b1_sep16_scaffold_1118_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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3117..3956
DNA (840bp) protein (280aa)
Metallo-beta-lactamase family protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TD20_9CHLR
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:EFH90071.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
beta-lactamase domain protein
PLM2_30_b1_sep16_scaffold_1118_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3976..5424
DNA (1449bp) protein (483aa)
Major facilitator superfamily MFS_1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWD2_9BACT
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EDY21724.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
putative sugar transport protein
PLM2_30_b1_sep16_scaffold_1118_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(5546..6091)
DNA (546bp) protein (182aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
2'-5' RNA ligase Tax=Chthoniobacter flavus Ellin428 RepID=B4D614_9BACT
2'-5' RNA ligase
PLM2_30_b1_sep16_scaffold_1118_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(6168..7202)
DNA (1035bp) protein (345aa)
Short-chain dehydrogenase/reductase SDR Tax=Pedosphaera parvula Ellin514 RepID=B9XRS8_9BACT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EEF57439.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_1118_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(7268..7729)
DNA (462bp) protein (154aa)
SsrA-binding protein Tax=Chthoniobacter flavus Ellin428 RepID=B4DCN7_9BACT
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SsrA-binding protein
PLM2_30_b1_sep16_scaffold_1118_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(7790..8107)
DNA (318bp) protein (106aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA-directed RNA polymerase subunit omega Tax=Chthoniobacter flavus Ellin428 RepID=B4DCN8_9BACT
DNA-directed RNA polymerase subunit omega
PLM2_30_b1_sep16_scaffold_1118_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(8244..9893)
DNA (1650bp) protein (550aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D3W8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18948.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_1118_trna_1
unknown

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10123..10196
DNA (74bp)
transferRNA Pro
PLM2_30_b1_sep16_scaffold_1118_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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10361..10894
DNA (534bp) protein (178aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D489_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18690.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_30_b1_sep16_scaffold_1118_14

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11331..11654
DNA (324bp) protein (108aa)
Adenylate and Guanylate cyclase catalytic domain protein {ECO:0000313|EMBL:AIA18981.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM2_30_b1_sep16_scaffold_1118_15
unknown

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comp(11575..11814)
DNA (240bp) protein (80aa)

This feature has no annotations

Displaying 16 items

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