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PLM2_30_b1_sep16_scaffold_1118_11

Organism: PLM2_30_b1_sep16_Chthoniobacter_flavus_55_21

near complete RP 44 / 55 MC: 1 BSCG 46 / 51 ASCG 12 / 38
Location: comp(7790..8107)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 71.0
  • Bit_score: 93
  • Evalue 1.20e-16
DNA-directed RNA polymerase subunit omega Tax=Chthoniobacter flavus Ellin428 RepID=B4DCN8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 71.0
  • Bit_score: 93
  • Evalue 8.90e-17
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 63.0
  • Bit_score: 68
  • Evalue 1.10e-09

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 318
ATGCTCGCCCCGCAACTCACGCCATCCACCCTCGCGGCCAGGATGCCGGTCATTCTTCAATTCCCGACAGAAGCAACCCGCTCCGTTCGTTCCTTGCGCCATATGACGACACAACTTCTTCACGAAGCAGCTCAGGTGATCCCCAATCAGCAACTTCTGATTAATGTTGTTTCCAAGCGCGTGCGTCAGCTTGGCTTGGGACATCGACCATTGGTGGAGACGACGCCGCGAATGTCGTTGACCGATATTGCGCTTAAGGAAATCATTGCTGGGAAGCTGGCTTACGAGGCGCTCGAGAGTTCCTCGGACGGCGCTTAG
PROTEIN sequence
Length: 106
MLAPQLTPSTLAARMPVILQFPTEATRSVRSLRHMTTQLLHEAAQVIPNQQLLINVVSKRVRQLGLGHRPLVETTPRMSLTDIALKEIIAGKLAYEALESSSDGA*