ggKbase home page

PLM2_30_b1_sep16_scaffold_1895

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_b1_sep16_scaffold_1895_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

118..2064
DNA (1947bp) protein (649aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
acetyl-coenzyme A synthetase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase Tax=Pedosphaera parvula Ellin514 RepID=B9XLV4_9BACT
PLM2_30_b1_sep16_scaffold_1895_2
unknown

Not on your lists

2174..4051
DNA (1878bp) protein (626aa)
Protein TolA Tax=Vibrio cholerae HE-45 RepID=J1ET25_VIBCL
TolA protein
PLM2_30_b1_sep16_scaffold_1895_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

4065..4721
DNA (657bp) protein (219aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924};; EC=3.4.13.22 {ECO:0000256|HAMAP-Rule:MF_01924};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Peptidase M15D vanX D-ala-D-ala dipeptidase Tax=Chthoniobacter flavus Ellin428 RepID=B4D5A8_9BACT
peptidase M15D vanX D-ala-D-ala dipeptidase
PLM2_30_b1_sep16_scaffold_1895_4

Not on your lists

4718..5227
DNA (510bp) protein (170aa)
Putative uncharacterized protein Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DZ83_METI4
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49165.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM2_30_b1_sep16_scaffold_1895_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5292..6728
DNA (1437bp) protein (479aa)
Amino acid permease-associated region Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025N4_SOLUE
amino acid permease-associated region
Amino acid permease-associated region {ECO:0000313|EMBL:AHG88670.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_30_b1_sep16_scaffold_1895_6
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6742..7059)
DNA (318bp) protein (106aa)
Protein involved in tolerance to divalent cations Tax=Herbaspirillum sp. CF444 RepID=J2LQD5_9BURK
cutA
Protein involved in tolerance to divalent cations {ECO:0000313|EMBL:EJL94490.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
PLM2_30_b1_sep16_scaffold_1895_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7063..8226)
DNA (1164bp) protein (388aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
tRNA-specific 2-thiouridylase MnmA Tax=Chthoniobacter flavus Ellin428 RepID=B4D711_9BACT
trmU; tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase
PLM2_30_b1_sep16_scaffold_1895_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(8328..8915)
DNA (588bp) protein (196aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
3-methyladenine DNA glycosylase (EC:3.2.2.-)
Putative 3-methyladenine DNA glycosylase Tax=Chthoniobacter flavus Ellin428 RepID=B4CVR3_9BACT
PLM2_30_b1_sep16_scaffold_1895_9
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8959..9423)
DNA (465bp) protein (155aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Displaying 9 items

View Taxonomy