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PLM2_30_coex_sep16_scaffold_1320

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_coex_sep16_scaffold_1320_1
Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(60..173)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 Tax=Propionibacterium RepID=U1F6K7_9ACTO
50S ribosomal protein L36
PLM2_30_coex_sep16_scaffold_1320_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(190..408)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKJ1_9BACT
infA; translation initiation factor IF-1
PLM2_30_coex_sep16_scaffold_1320_3
Streptomyces sulphureus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(547..1284)
DNA (738bp) protein (246aa)
hypothetical protein Tax=Streptomyces sulphureus RepID=UPI00037DCD9E
SC8F4.01c; large Ala/Glu-rich protein
PLM2_30_coex_sep16_scaffold_1320_4
Frankia sp. BMG5.12, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1450..2145)
DNA (696bp) protein (232aa)
sugar-binding protein Tax=Frankia sp. BMG5.12 RepID=UPI00036EC135
putative cellulose-binding protein
PLM2_30_coex_sep16_scaffold_1320_5
unknown

Not on your lists

comp(2224..2979)
DNA (756bp) protein (252aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] bin=bin7_NC10_sister species=Orenia marismortui genus=Orenia taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
methionine aminopeptidase
PLM2_30_coex_sep16_scaffold_1320_6
Thermodesulfobacterium thermophilum, Thermodesulfobacterium, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

comp(2976..3638)
DNA (663bp) protein (221aa)
adenylate kinase Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B5A716
adenylate kinase
PLM2_30_coex_sep16_scaffold_1320_7
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


comp(3641..4927)
DNA (1287bp) protein (429aa)
Protein translocase subunit SecY Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M2Z2_ACIFD
preprotein translocase subunit SecY
PLM2_30_coex_sep16_scaffold_1320_8
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


comp(4948..5385)
DNA (438bp) protein (146aa)
50S ribosomal protein L15 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M2Z1_ACIFD
50S ribosomal protein L15
PLM2_30_coex_sep16_scaffold_1320_9
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5382..5603)
DNA (222bp) protein (74aa)
50S ribosomal protein L30 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKG8_DESK7
50S ribosomal protein L30
PLM2_30_coex_sep16_scaffold_1320_10
Actinomyces sp. oral taxon 848, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(5590..6189)
DNA (600bp) protein (200aa)
30S ribosomal protein S5 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WPB3_9ACTO
30S ribosomal protein S5
PLM2_30_coex_sep16_scaffold_1320_11
Austwickia chelonae, Austwickia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6189..6560)
DNA (372bp) protein (124aa)
50S ribosomal protein L18 Tax=Austwickia chelonae NBRC 105200 RepID=K6UMH2_9MICO
rplR; 50S ribosomal protein L18
PLM2_30_coex_sep16_scaffold_1320_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6557..7108)
DNA (552bp) protein (184aa)
50S ribosomal protein L6 Tax=Clostridium sp. CAG:226 RepID=R5BAL3_9CLOT
50S ribosomal protein L6
PLM2_30_coex_sep16_scaffold_1320_13
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(7119..7538)
DNA (420bp) protein (140aa)
30S ribosomal protein S8 Tax=Pelosinus fermentans RepID=I8SZ41_9FIRM
ribosomal protein S8
PLM2_30_coex_sep16_scaffold_1320_14
Caldibacillus debilis, Caldibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(7532..7717)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 Tax=Caldibacillus debilis RepID=UPI000362BD12
30S ribosomal protein S14
PLM2_30_coex_sep16_scaffold_1320_15
Actinomadura madurae, Actinomadura, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7730..8311)
DNA (582bp) protein (194aa)
50S ribosomal protein L5 Tax=Actinomadura madurae LIID-AJ290 RepID=U2P892_9ACTO
50S ribosomal protein L5
PLM2_30_coex_sep16_scaffold_1320_16
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8308..8646)
DNA (339bp) protein (113aa)
50S ribosomal protein L24 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U831_ETHHY
50S ribosomal protein L24
PLM2_30_coex_sep16_scaffold_1320_17
Frankia sp. CN3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(8649..9017)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 Tax=Frankia sp. CN3 RepID=G6HES0_9ACTO
50S ribosomal protein L14
PLM2_30_coex_sep16_scaffold_1320_18
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9025..9324)
DNA (300bp) protein (100aa)
30S ribosomal protein S17 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003712DA4
30S ribosomal protein S17
PLM2_30_coex_sep16_scaffold_1320_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9288..9689)
DNA (402bp) protein (134aa)
50S ribosomal protein L29 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWD6_PSEUX
50S ribosomal protein L29
PLM2_30_coex_sep16_scaffold_1320_20
Paenibacillus ginsengihumi, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(9686..10105)
DNA (420bp) protein (140aa)
50S ribosomal protein L16 Tax=Paenibacillus ginsengihumi RepID=UPI00037540E6
50S ribosomal protein L16
PLM2_30_coex_sep16_scaffold_1320_21
Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(10105..10986)
DNA (882bp) protein (294aa)
30S ribosomal protein S3 Tax=Streptomyces RepID=UPI000262F280
rpsC; 30S ribosomal protein S3
PLM2_30_coex_sep16_scaffold_1320_22
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(10987..11331)
DNA (345bp) protein (115aa)
50S ribosomal protein L22 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6W888_9ACTO
50S ribosomal protein L22
PLM2_30_coex_sep16_scaffold_1320_23
Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11335..11616)
DNA (282bp) protein (94aa)
30S ribosomal protein S19 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=RS19_THETN
rpsS; 30S ribosomal protein S19
PLM2_30_coex_sep16_scaffold_1320_24
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(11619..12449)
DNA (831bp) protein (277aa)
50S ribosomal protein L2 Tax=Nocardiopsis alba (strain ATCC BAA-2165 / BE74) RepID=J7LE39_NOCAA
rplB; ribosomal protein L2
PLM2_30_coex_sep16_scaffold_1320_25
Propionimicrobium lymphophilum, Propionimicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12452..12742)
DNA (291bp) protein (97aa)
50S ribosomal protein L23 Tax=Propionimicrobium lymphophilum ACS-093-V-SCH5 RepID=S2W1G0_9ACTO
50S ribosomal protein L25/l23
PLM2_30_coex_sep16_scaffold_1320_26
Propionimicrobium lymphophilum, Propionimicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12739..13437)
DNA (699bp) protein (233aa)
50S ribosomal protein L4 Tax=Propionimicrobium lymphophilum ACS-093-V-SCH5 RepID=S2W3S5_9ACTO
rplD; 50S ribosomal protein L4
PLM2_30_coex_sep16_scaffold_1320_27
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13437..14090)
DNA (654bp) protein (218aa)
50S ribosomal protein L3 Tax=Frankia sp. EUN1f RepID=D3CUS5_9ACTO
50S ribosomal protein L3
PLM2_30_coex_sep16_scaffold_1320_28
Actinomadura madurae, Actinomadura, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(14093..14401)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MF67_9ACTO
rpsJ; 30S ribosomal protein S10
PLM2_30_coex_sep16_scaffold_1320_29
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(14420..14557)
DNA (138bp) protein (46aa)
Elongation factor Tu Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZXT7_9ACTN
translation elongation factor Tu
Displaying 29 items

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