ggKbase home page

PLM2_30_coex_sep16_scaffold_1351

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_coex_sep16_scaffold_1351_1
Streptomyces somaliensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..698
DNA (696bp) protein (232aa)
REX family transcriptional regulator Tax=Streptomyces somaliensis RepID=UPI00029A56D5
redox-sensing transcriptional repressor Rex
PLM2_30_coex_sep16_scaffold_1351_2
unknown

Not on your lists

comp(738..848)
DNA (111bp) protein (37aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_1351_3
unknown

Not on your lists

comp(861..1604)
DNA (744bp) protein (248aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_1351_4
unknown

Not on your lists

comp(1601..2335)
DNA (735bp) protein (245aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_1351_5
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2346..3083)
DNA (738bp) protein (246aa)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI00036CA257
putative iron-sulfur protein
PLM2_30_coex_sep16_scaffold_1351_6
actinobacterium SCGC AAA015-D07, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3080..3910)
DNA (831bp) protein (277aa)
hypothetical protein Tax=actinobacterium SCGC AAA015-D07 RepID=UPI00037480E0
putative menaquinol-cytochrome c reductase cytochrome b subunit
PLM2_30_coex_sep16_scaffold_1351_7
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(3919..4689)
DNA (771bp) protein (257aa)
Putative menaquinol-cytochrome c reductase cytochrome b subunit Tax=Ilumatobacter coccineus YM16-304 RepID=M5AGV0_9ACTN
putative menaquinol-cytochrome c reductase cytochrome b subunit
PLM2_30_coex_sep16_scaffold_1351_8
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4716..5114)
DNA (399bp) protein (133aa)
Uncharacterized protein Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z5R8_9ACTN
putative 4Fe-4S ferredoxin
PLM2_30_coex_sep16_scaffold_1351_9
unknown

Not on your lists

comp(5146..5496)
DNA (351bp) protein (117aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_1351_10
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5632..6384
DNA (753bp) protein (251aa)
Cytochrome c-type biogenesis protein CcdA thiol-disulfide oxido-reductase Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RQ46_BLASD
cytochrome C biogenesis protein, transmembrane region
PLM2_30_coex_sep16_scaffold_1351_11
Streptomyces vitaminophilus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6429..7982
DNA (1554bp) protein (518aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI000362D9E5
Cytochrome C biogenesis membrane protein
PLM2_30_coex_sep16_scaffold_1351_12
Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7979..8914
DNA (936bp) protein (312aa)
Cytochrome c-type biogenesis protein CcsB Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AVJ4_FRADG
cytochrome c-type biogenesis protein CcsB
PLM2_30_coex_sep16_scaffold_1351_13
Chloroflexi bacterium SCGC AB-629-P13, Chloroflexi, Bacteria

Not on your lists

8914..10035
DNA (1122bp) protein (374aa)
hypothetical protein Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI00037401EB
cytochrome c oxidase subunit II
PLM2_30_coex_sep16_scaffold_1351_14
actinobacterium SCGC AAA015-M09, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10052..11950
DNA (1899bp) protein (633aa)
putative cytochrome c oxidase subunit I/subunit III (EC:1.9.3.1)
hypothetical protein Tax=actinobacterium SCGC AAA015-M09 RepID=UPI00037CE9F5
PLM2_30_coex_sep16_scaffold_1351_15
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

11959..12561
DNA (603bp) protein (201aa)
Cytochrome c oxidase subunit III Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C451_SPHTD
cytochrome c oxidase subunit III
PLM2_30_coex_sep16_scaffold_1351_16
unknown

Not on your lists

12571..12909
DNA (339bp) protein (113aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
PLM2_30_coex_sep16_scaffold_1351_17
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

12906..13745
DNA (840bp) protein (280aa)
Uncharacterized protein Tax=Ilumatobacter coccineus YM16-304 RepID=M5A5V0_9ACTN
hypothetical protein
PLM2_30_coex_sep16_scaffold_1351_18
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13742..15010
DNA (1269bp) protein (423aa)
Blue (Type 1) copper domain protein Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7KDT6_METBM
blue (type 1) copper domain protein
PLM2_30_coex_sep16_scaffold_1351_19
Nocardiopsis potens, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15112..15483
DNA (372bp) protein (124aa)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI000344BC52
Redoxin domain-containing protein
PLM2_30_coex_sep16_scaffold_1351_20
unknown

Not on your lists

comp(15490..16929)
DNA (1440bp) protein (480aa)
protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) (EC:2.5.1.-)
Protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Displaying 20 items

View Taxonomy