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PLM2_30_coex_sep16_scaffold_492

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_coex_sep16_scaffold_492_1
unknown

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comp(2..328)
DNA (327bp) protein (109aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_492_2
Serinicoccus profundi, Serinicoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(336..1082)
DNA (747bp) protein (249aa)
glnQ2; amino acid ABC transporter ATP-binding protein n, PAAT family (EC:3.6.3.21)
ABC transporter Tax=Serinicoccus profundi RepID=UPI000255E5D1
PLM2_30_coex_sep16_scaffold_492_3
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1084..2241)
DNA (1158bp) protein (386aa)
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYQ4_RUBXD
amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
PLM2_30_coex_sep16_scaffold_492_4
Methanococcus maripaludis, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(2315..3172)
DNA (858bp) protein (286aa)
Extracellular solute-binding protein family 3 Tax=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) RepID=A6VIL8_METM7
extracellular solute-binding protein
PLM2_30_coex_sep16_scaffold_492_5
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3293..4501)
DNA (1209bp) protein (403aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VP96_POLNA
extracellular ligand-binding receptor
PLM2_30_coex_sep16_scaffold_492_trna_1
unknown

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4875..4957
DNA (83bp)
transferRNA Leu
PLM2_30_coex_sep16_scaffold_492_6
unknown

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comp(4962..6116)
DNA (1155bp) protein (385aa)
FAD dependent oxidoreductase; K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1] bin=bin9_gal15 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
FAD dependent oxidoreductase
PLM2_30_coex_sep16_scaffold_492_7
Frankia sp. Iso899, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6113..6991)
DNA (879bp) protein (293aa)
ornithine cyclodeaminase Tax=Frankia sp. Iso899 RepID=UPI0003B45D79
ornithine cyclodeaminase
PLM2_30_coex_sep16_scaffold_492_8
Kribbella catacumbae, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7039..7827)
DNA (789bp) protein (263aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00036EE9E9
ABC transporter-like protein
PLM2_30_coex_sep16_scaffold_492_9
Kribbella catacumbae, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7824..8609)
DNA (786bp) protein (262aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00035C9A5B
ABC transporter-like protein
PLM2_30_coex_sep16_scaffold_492_10
Kribbella catacumbae, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8606..10363)
DNA (1758bp) protein (586aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000371758B
leucine/isoleucine/valine transporter permease subunit
PLM2_30_coex_sep16_scaffold_492_11
unknown

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comp(10368..11447)
DNA (1080bp) protein (360aa)
tro:trd_A0635 inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
inner-membrane translocator
PLM2_30_coex_sep16_scaffold_492_12
unknown

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comp(11543..12877)
DNA (1335bp) protein (445aa)
branched-chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
branched-chain amino acid ABC transporter substrate-binding protein
PLM2_30_coex_sep16_scaffold_492_13
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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comp(13103..13903)
DNA (801bp) protein (267aa)
trpA; tryptophan synthase alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z657_9ACTN
PLM2_30_coex_sep16_scaffold_492_14
Armatimonadetes bacterium JGI 0000077-K19, Armatimonadetes, Bacteria

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comp(13869..15089)
DNA (1221bp) protein (407aa)
tryptophan synthase subunit beta Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B2FE96
tryptophan synthase subunit beta
PLM2_30_coex_sep16_scaffold_492_15
unknown

Not on your lists

comp(15086..15859)
DNA (774bp) protein (258aa)
trpC; indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PLM2_30_coex_sep16_scaffold_492_16
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15886..16596)
DNA (711bp) protein (237aa)
phosphoribosyl isomerase A (EC:5.3.1.24)
Phosphoribosyl isomerase A Tax=Streptomyces sp. HPH0547 RepID=S3B3K9_9ACTO
PLM2_30_coex_sep16_scaffold_492_17
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16603..20118)
DNA (3516bp) protein (1172aa)
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTR7_ACIC1
PLM2_30_coex_sep16_scaffold_492_18
Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

20255..21328
DNA (1074bp) protein (358aa)
Conserved domain protein Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z8T7_DEHE1
exonuclease
PLM2_30_coex_sep16_scaffold_492_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(21338..22231)
DNA (894bp) protein (298aa)
Pseudouridine synthase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F076_CONWI
pseudouridine synthase
PLM2_30_coex_sep16_scaffold_492_20
Streptomyces sp. BoleA5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22233..22709)
DNA (477bp) protein (159aa)
lipoprotein signal peptidase (EC:3.4.23.36)
hypothetical protein Tax=Streptomyces sp. BoleA5 RepID=UPI000372F720
PLM2_30_coex_sep16_scaffold_492_21
Actinomadura atramentaria, Actinomadura, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22720..23250)
DNA (531bp) protein (177aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI000370F0B1
TraR/DksA family transcriptional regulator
PLM2_30_coex_sep16_scaffold_492_22
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23574..26621
DNA (3048bp) protein (1016aa)
Isoleucine--tRNA ligase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A7T6_THECD
isoleucyl-tRNA synthetase
PLM2_30_coex_sep16_scaffold_492_23
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26664..27329)
DNA (666bp) protein (222aa)
DivIVA domain protein Tax=Clostridium bartlettii CAG:1329 RepID=R5X5G2_9CLOT
DivIVA; cell division initiation protein
PLM2_30_coex_sep16_scaffold_492_24
Nocardia asteroides, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27344..27634)
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=Nocardia asteroides NBRC 15531 RepID=U5E3F3_NOCAS
hypothetical protein
PLM2_30_coex_sep16_scaffold_492_25
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27662..27856)
DNA (195bp) protein (65aa)
Cell division protein SepF Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M2ZUN3_STRMB
hypothetical protein
Displaying 26 items

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