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PLM2_30_coex_sep16_scaffold_833

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_coex_sep16_scaffold_833_trna_1
unknown

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164..234
DNA (71bp)
transferRNA Gly
PLM2_30_coex_sep16_scaffold_833_1
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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comp(267..956)
DNA (690bp) protein (230aa)
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III Tax=Chthonomonas calidirosea T49 RepID=S0EVF7_9BACT
PLM2_30_coex_sep16_scaffold_833_2
Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(984..2246)
DNA (1263bp) protein (421aa)
Replicative DNA helicase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B062_FRADG
replicative DNA helicase
PLM2_30_coex_sep16_scaffold_833_3
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2628..3077)
DNA (450bp) protein (150aa)
50S ribosomal protein L9 Tax=Nocardioides sp. CF8 RepID=R7XSR8_9ACTO
50S ribosomal protein L9
PLM2_30_coex_sep16_scaffold_833_4
Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3074..3346)
DNA (273bp) protein (91aa)
30S ribosomal protein S18 Tax=Frankia RepID=E3IZT6_FRASU
30S ribosomal protein S18
PLM2_30_coex_sep16_scaffold_833_5
Mycobacterium canettii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3336..3794)
DNA (459bp) protein (153aa)
Single-stranded DNA-binding protein Tax=Mycobacterium canettii CIPT 140070008 RepID=L0Q1Y4_9MYCO
ssb; Putative single-strand binding protein Ssb (helix-destabilizing protein)
PLM2_30_coex_sep16_scaffold_833_6
Nocardia sp. BMG111209, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3853..4122)
DNA (270bp) protein (90aa)
30S ribosomal protein S6 Tax=Nocardia sp. BMG111209 RepID=UPI00035DC73B
rpsF; 30S ribosomal protein S6
PLM2_30_coex_sep16_scaffold_833_7
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4376..5167
DNA (792bp) protein (264aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase Tax=Syntrophus aciditrophicus (strain SB) RepID=PANB_SYNAS
PLM2_30_coex_sep16_scaffold_833_8
Geobacter sp., Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5364..6038
DNA (675bp) protein (225aa)
Multi-sensor signal transduction histidine kinase Tax=Geobacter sp. (strain M18) RepID=E8WM06_GEOS8
multi-sensor signal transduction histidine kinase
PLM2_30_coex_sep16_scaffold_833_9
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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6044..6721
DNA (678bp) protein (226aa)
Two component transcriptional regulator, LuxR family Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y6C7_THEBD
LuxR family two component transcriptional regulator
PLM2_30_coex_sep16_scaffold_833_10
Sporichthya polymorpha, Sporichthya, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6879..8099
DNA (1221bp) protein (407aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI000367478D
hypothetical protein
PLM2_30_coex_sep16_scaffold_833_11
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8096..9253
DNA (1158bp) protein (386aa)
Integral membrane protein-like protein Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LWJ6_ACIC1
integral membrane protein-like protein
PLM2_30_coex_sep16_scaffold_833_12
unknown

Not on your lists

comp(10695..11039)
DNA (345bp) protein (115aa)
Dimeric alpha+beta barrel bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
PLM2_30_coex_sep16_scaffold_833_13
Sporichthya polymorpha, Sporichthya, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11131..11532)
DNA (402bp) protein (134aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI0003673B26
hypothetical protein
PLM2_30_coex_sep16_scaffold_833_14
unknown

Not on your lists

12044..12307
DNA (264bp) protein (88aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_833_15
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13066..13737
DNA (672bp) protein (224aa)
Two-component response regulator Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RQ9_SYMTH
two-component response regulator
PLM2_30_coex_sep16_scaffold_833_16
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13803..15968
DNA (2166bp) protein (722aa)
Candidate histidine kinase, classic Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX75_RAMTT
histidine kinase
PLM2_30_coex_sep16_scaffold_833_17
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15987..17519)
DNA (1533bp) protein (511aa)
Glycosyl transferase, family 51 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LWU7_ACIC1
glycosyl transferase family protein
Displaying 18 items

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