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PLM2_30_coex_sep16_scaffold_1637

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_coex_sep16_scaffold_1637_1
unknown

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1..867
DNA (867bp) protein (289aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_1637_2
unknown

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924..1178
DNA (255bp) protein (85aa)
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 bin=bin8_Chloro species=Laceyella sacchari genus=Laceyella taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
rpsP; 30S ribosomal protein S16
PLM2_30_coex_sep16_scaffold_1637_3
unknown

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1187..1420
DNA (234bp) protein (78aa)
UPF0109 protein Swol_1496 bin=GWC2_Chloroflexi_73_18 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
KH domain RNA binding protein YlqC
PLM2_30_coex_sep16_scaffold_1637_4
unknown

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1436..2071
DNA (636bp) protein (212aa)
Ribosome maturation factor RimM bin=GWC2_Chloroflexi_73_18 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
rimM; 16S rRNA-processing protein RimM
PLM2_30_coex_sep16_scaffold_1637_5
unknown

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2079..2813
DNA (735bp) protein (245aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase bin=GWC2_Chloroflexi_73_18 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_1637_6
unknown

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2933..3283
DNA (351bp) protein (117aa)
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 bin=bin8_Chloro species=Lactobacillus versmoldensis genus=Lactobacillus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
50S ribosomal protein L19
PLM2_30_coex_sep16_scaffold_1637_7
unknown

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3369..4142
DNA (774bp) protein (258aa)
rnhB; ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4] bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin8_Chloro organism_group=Chloroflexi
rnhB; ribonuclease HII
PLM2_30_coex_sep16_scaffold_1637_8
unknown

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4254..4640
DNA (387bp) protein (129aa)
UPI00029882A6 related cluster bin=GWC2_Chloroflexi_73_18 species=Propionibacterium acidipropionici genus=Propionibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
PLM2_30_coex_sep16_scaffold_1637_9
unknown

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4867..5826
DNA (960bp) protein (320aa)
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
30S ribosomal protein S2
PLM2_30_coex_sep16_scaffold_1637_10
unknown

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5905..6504
DNA (600bp) protein (200aa)
elongation factor Ts; K02357 elongation factor Ts bin=bin8_Chloro species=Paenibacillus sp. A9 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
translation elongation factor Ts
PLM2_30_coex_sep16_scaffold_1637_11
unknown

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6501..7274
DNA (774bp) protein (258aa)
uridylate kinase (EC:2.7.4.22)
Uridylate kinase bin=GWC2_Chloroflexi_73_18 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_1637_12
unknown

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7271..7828
DNA (558bp) protein (186aa)
Ribosome-recycling factor bin=GWC2_Chloroflexi_73_18 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ribosome recycling factor
PLM2_30_coex_sep16_scaffold_1637_13
unknown

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7828..8628
DNA (801bp) protein (267aa)
Isoprenyl transferase bin=GWC2_Chloroflexi_73_18 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
uppS; undecaprenyl pyrophosphate synthase
PLM2_30_coex_sep16_scaffold_1637_14
unknown

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8661..9491
DNA (831bp) protein (277aa)
Phosphatidate cytidylyltransferase bin=GWC2_Chloroflexi_73_18 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
phosphatidate cytidylyltransferase
PLM2_30_coex_sep16_scaffold_1637_15
unknown

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9493..10719
DNA (1227bp) protein (409aa)
Dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] bin=bin8_Chloro species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
PLM2_30_coex_sep16_scaffold_1637_16
unknown

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10716..11849
DNA (1134bp) protein (378aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
membrane-associated zinc metalloprotease
PLM2_30_coex_sep16_scaffold_1637_17
unknown

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11854..13128
DNA (1275bp) protein (425aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] bin=bin8_Chloro species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
PLM2_30_coex_sep16_scaffold_1637_18
unknown

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13299..14711
DNA (1413bp) protein (471aa)
transcription termination factor NusA; K02600 N utilization substance protein A bin=bin8_Chloro species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
nusA; transcription termination factor nusa
PLM2_30_coex_sep16_scaffold_1637_19
unknown

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15021..16931
DNA (1911bp) protein (637aa)
translation initiation factor IF-2; K02519 translation initiation factor IF-2 bin=bin8_Chloro species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
translation initiation factor IF-2
PLM2_30_coex_sep16_scaffold_1637_20
unknown

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16947..17471
DNA (525bp) protein (175aa)
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A bin=bin8_Chloro species=Bacillus sp. 37MA genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
ribosome-binding factor A
PLM2_30_coex_sep16_scaffold_1637_21
unknown

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17468..17707
DNA (240bp) protein (80aa)
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
phosphoesterase
Displaying 21 items

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