ggKbase home page

PLM2_30_coex_sep16_scaffold_47

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_coex_sep16_scaffold_47_1
unknown

Not on your lists

1..1020
DNA (1020bp) protein (340aa)
class III aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] bin=bin8_Chloro species=Intrasporangium calvum genus=Intrasporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
class III aminotransferase
PLM2_30_coex_sep16_scaffold_47_2
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1030..1476)
DNA (447bp) protein (149aa)
Putative uncharacterized protein Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QKG9_DESAH
hypothetical protein
PLM2_30_coex_sep16_scaffold_47_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1539..4613
DNA (3075bp) protein (1025aa)
hypothetical protein Tax=Rhizobium leguminosarum RepID=UPI00037C6E99
hypothetical protein
PLM2_30_coex_sep16_scaffold_47_4
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4610..5053
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=Rhizobium sp. (strain NGR234) RepID=C3MI29_RHISN
hypothetical protein
PLM2_30_coex_sep16_scaffold_47_5
Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5103..5579
DNA (477bp) protein (159aa)
Transcriptional regulator, MarR family Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AWG7_FRADG
MarR family transcriptional regulator
PLM2_30_coex_sep16_scaffold_47_6
unknown

Not on your lists

comp(5581..6840)
DNA (1260bp) protein (420aa)
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; K01438 acetylornithine deacetylase [EC:3.5.1.16] bin=bin8_Chloro species=Streptomyces viridochromogenes genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
peptidase dimerization domain-containing protein
PLM2_30_coex_sep16_scaffold_47_7
unknown

Not on your lists

comp(6837..7703)
DNA (867bp) protein (289aa)
amidinotransferase bin=bin8_Chloro species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
amidinotransferase
PLM2_30_coex_sep16_scaffold_47_8
unknown

Not on your lists

7773..8000
DNA (228bp) protein (76aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_47_9
unknown

Not on your lists

8528..9211
DNA (684bp) protein (228aa)
hypothetical protein bin=bin8_Chloro species=Truepera radiovictrix genus=Truepera taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
PLM2_30_coex_sep16_scaffold_47_10
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(9187..10380)
DNA (1194bp) protein (398aa)
FAD dependent oxidoreductase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C807_SPHTD
FAD dependent oxidoreductase
PLM2_30_coex_sep16_scaffold_47_11
unknown

Not on your lists

comp(10377..11636)
DNA (1260bp) protein (420aa)
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase family protein bin=GWC2_Chloroflexi_73_18 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_47_12
unknown

Not on your lists

11762..12274
DNA (513bp) protein (171aa)
MarR family transcriptional regulator bin=bin8_Chloro species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
MarR family transcription regulator
PLM2_30_coex_sep16_scaffold_47_13
unknown

Not on your lists

12271..12987
DNA (717bp) protein (239aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
PLM2_30_coex_sep16_scaffold_47_14
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13004..13330)
DNA (327bp) protein (109aa)
Uncharacterized protein Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82WP2_NITEU
hypothetical protein
PLM2_30_coex_sep16_scaffold_47_15
unknown

Not on your lists

13386..14660
DNA (1275bp) protein (425aa)
hypothetical protein bin=bin8_Chloro species=Truepera radiovictrix genus=Truepera taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
PLM2_30_coex_sep16_scaffold_47_16
unknown

Not on your lists

comp(14664..15338)
DNA (675bp) protein (225aa)
hypothetical protein; K09807 hypothetical protein bin=bin8_Chloro species=Rhizobium mongolense genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
PLM2_30_coex_sep16_scaffold_47_17
unknown

Not on your lists

comp(15335..16204)
DNA (870bp) protein (290aa)
iron permease FTR1; K07243 high-affinity iron transporter bin=bin8_Chloro species=Stackebrandtia nassauensis genus=Stackebrandtia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
iron permease FTR1
PLM2_30_coex_sep16_scaffold_47_18
unknown

Not on your lists

16553..19054
DNA (2502bp) protein (834aa)
Penicillin-binding protein, 1A family bin=GWC2_Chloroflexi_73_18 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
penicillin-binding protein
PLM2_30_coex_sep16_scaffold_47_19
unknown

Not on your lists

19057..20238
DNA (1182bp) protein (394aa)
Putative uncharacterized protein bin=GWB2_Chloroflexi_54_36 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
PLM2_30_coex_sep16_scaffold_47_20
unknown

Not on your lists

20351..24961
DNA (4611bp) protein (1537aa)
Putative Histidine kinase Tax=Nitrolancetus hollandicus Lb RepID=I4EI33_9CHLR
hypothetical protein
PLM2_30_coex_sep16_scaffold_47_21
unknown

Not on your lists

25165..25518
DNA (354bp) protein (118aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_47_22
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(25597..26556)
DNA (960bp) protein (320aa)
Mg2+ transporter protein, CorA-like protein Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1J1G9_DEIGD
Mg2+ transporter protein, CorA-like protein
PLM2_30_coex_sep16_scaffold_47_23
unknown

Not on your lists

comp(26567..26701)
DNA (135bp) protein (45aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_47_24
unknown

Not on your lists

27019..27222
DNA (204bp) protein (68aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_47_25
Kocuria sp. UCD-OTCP, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27828..28109
DNA (282bp) protein (94aa)
hypothetical protein Tax=Kocuria sp. UCD-OTCP RepID=UPI0003622C49
hypothetical protein
PLM2_30_coex_sep16_scaffold_47_26
Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28201..28665
DNA (465bp) protein (155aa)
cyclase Tax=Streptomyces RepID=UPI000367EA26
cyclase/dehydrase
PLM2_30_coex_sep16_scaffold_47_27
unknown

Not on your lists

28816..29172
DNA (357bp) protein (119aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_47_28
unknown

Not on your lists

comp(29735..30112)
DNA (378bp) protein (126aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_47_29
unknown

Not on your lists

30340..30558
DNA (219bp) protein (73aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_47_30
Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30643..31107)
DNA (465bp) protein (155aa)
Uncharacterized protein Tax=Gordonia RepID=J9S9B2_9ACTO
hypothetical protein
Displaying items 1-30 of 45 in total

View Taxonomy