ggKbase home page

PLM2_30_coex_sep16_scaffold_63

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_coex_sep16_scaffold_63_1
unknown

Not on your lists

1..777
DNA (777bp) protein (259aa)
DegS sensor signal transduction histidine kinase; K07777 two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] bin=bin8_Chloro species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
DegS sensor signal transduction histidine kinase
PLM2_30_coex_sep16_scaffold_63_2
unknown

Not on your lists

789..1526
DNA (738bp) protein (246aa)
Two component transcriptional regulator, LuxR family bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
two component transcriptional regulator, LuxR family
PLM2_30_coex_sep16_scaffold_63_3
unknown

Not on your lists

1538..2743
DNA (1206bp) protein (402aa)
Histidine kinase bin=GWC2_Chloroflexi_73_18 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
histidine kinase
PLM2_30_coex_sep16_scaffold_63_4
unknown

Not on your lists

2759..2908
DNA (150bp) protein (50aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_63_5
unknown

Not on your lists

3033..3203
DNA (171bp) protein (57aa)
Flp/Fap pilin component; K02651 pilus assembly protein Flp/PilA bin=bin8_Chloro species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
PLM2_30_coex_sep16_scaffold_63_6
unknown

Not on your lists

3396..3566
DNA (171bp) protein (57aa)
Flp; flp pilus assembly protein, pilin Flp, pilin Flp; K02651 pilus assembly protein Flp/PilA bin=bin8_Chloro species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
Flp/Fap pilin component
PLM2_30_coex_sep16_scaffold_63_7
unknown

Not on your lists

3786..3980
DNA (195bp) protein (65aa)
Flp pilus assembly protein, pilin Flp, pilin Flp bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Flp; flp pilus assembly protein, pilin Flp, pilin Flp
PLM2_30_coex_sep16_scaffold_63_8
unknown

Not on your lists

4192..5079
DNA (888bp) protein (296aa)
Flp pilus assembly protein CpaB bin=GWC2_Chloroflexi_73_18 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_63_9
unknown

Not on your lists

5226..6500
DNA (1275bp) protein (425aa)
Response regulator receiver protein bin=GWC2_Chloroflexi_73_18 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
response regulator receiver protein
PLM2_30_coex_sep16_scaffold_63_10
unknown

Not on your lists

6549..7958
DNA (1410bp) protein (470aa)
type II secretion system protein E; K02283 pilus assembly protein CpaF bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
type II secretion system protein E
PLM2_30_coex_sep16_scaffold_63_11
unknown

Not on your lists

7978..8982
DNA (1005bp) protein (335aa)
Type II secretion system protein bin=GWC2_Chloroflexi_73_18 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
type II secretion system protein
PLM2_30_coex_sep16_scaffold_63_12
unknown

Not on your lists

8986..9936
DNA (951bp) protein (317aa)
type II secretion system protein; K12511 tight adherence protein C bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
type II secretion system protein
PLM2_30_coex_sep16_scaffold_63_13
unknown

Not on your lists

9968..10324
DNA (357bp) protein (119aa)
hypothetical protein bin=bin8_Chloro species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
PLM2_30_coex_sep16_scaffold_63_14
unknown

Not on your lists

10875..11093
DNA (219bp) protein (73aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_63_15
unknown

Not on your lists

11264..11878
DNA (615bp) protein (205aa)
Sigma 54 modulation protein/ribosomal protein S30EA bin=GWC2_Chloroflexi_73_18 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
30S ribosomal protein S30P;sigma 54 modulation protein
PLM2_30_coex_sep16_scaffold_63_16
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11919..12302)
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SFA7_GEOOG
hypothetical protein
PLM2_30_coex_sep16_scaffold_63_17
unknown

Not on your lists

12367..13359
DNA (993bp) protein (331aa)
apurinic endonuclease Apn1 (EC:3.1.21.2)
Probable endonuclease 4 bin=GWC2_Chloroflexi_73_18 species=Methanoculleus bourgensis genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_63_18
Mycobacterium tusciae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13376..14932
DNA (1557bp) protein (519aa)
Putative uncharacterized protein Tax=Mycobacterium tusciae JS617 RepID=H1K8J5_9MYCO
PLM2_30_coex_sep16_scaffold_63_19
unknown

Not on your lists

comp(15182..15757)
DNA (576bp) protein (192aa)
id=14628302 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
PLM2_30_coex_sep16_scaffold_63_20
unknown

Not on your lists

comp(16159..17388)
DNA (1230bp) protein (410aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
PLM2_30_coex_sep16_scaffold_63_21
unknown

Not on your lists

comp(17385..18095)
DNA (711bp) protein (237aa)
PHP domain protein bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PHP domain-containing protein
PLM2_30_coex_sep16_scaffold_63_22
unknown

Not on your lists

comp(18113..19111)
DNA (999bp) protein (333aa)
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
MreB/Mrl family cell shape determining protein
PLM2_30_coex_sep16_scaffold_63_23
unknown

Not on your lists

comp(19108..20448)
DNA (1341bp) protein (447aa)
UDP-N-acetylglucosamine1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
UDP-N-acetylglucosamine1-carboxyvinyltransferase
PLM2_30_coex_sep16_scaffold_63_24
unknown

Not on your lists

comp(20553..20987)
DNA (435bp) protein (145aa)
ATP synthase F1 subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14] bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
ATP synthase F1 subunit epsilon
PLM2_30_coex_sep16_scaffold_63_25
unknown

Not on your lists

comp(20987..22396)
DNA (1410bp) protein (470aa)
ATP synthase F1 subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
ATP synthase F1 subunit beta
PLM2_30_coex_sep16_scaffold_63_26
unknown

Not on your lists

comp(22448..23299)
DNA (852bp) protein (284aa)
ATP synthase F1 subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
ATP synthase F1 subunit gamma (EC:3.6.3.14)
PLM2_30_coex_sep16_scaffold_63_27
unknown

Not on your lists

comp(23343..24878)
DNA (1536bp) protein (512aa)
ATP synthase F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_63_28
unknown

Not on your lists

comp(24891..25433)
DNA (543bp) protein (181aa)
ATP synthase F1 subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
ATP synthase F1 subunit delta (EC:3.6.3.14)
PLM2_30_coex_sep16_scaffold_63_29
unknown

Not on your lists

comp(25433..26014)
DNA (582bp) protein (194aa)
ATP synthase F0 subunit B; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] bin=bin8_Chloro species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
atpF; ATP synthase F0 subunit B
PLM2_30_coex_sep16_scaffold_63_30
unknown

Not on your lists

comp(26036..26272)
DNA (237bp) protein (79aa)
ATP synthase F0 subcomplex C subunit (EC:3.6.3.14)
ATP synthase F0, C subunit bin=GWC2_Chloroflexi_73_18 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Displaying items 1-30 of 45 in total

View Taxonomy