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PLM2_30_coex_sep16_scaffold_81

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_coex_sep16_scaffold_81_1
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1565
DNA (1563bp) protein (521aa)
Uncharacterized protein Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z7H8_AZOL4
hypothetical protein
PLM2_30_coex_sep16_scaffold_81_2
unknown

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1562..2734
DNA (1173bp) protein (391aa)
group 1 glycosyl transferase family protein bin=CNBR_ACIDO species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
PLM2_30_coex_sep16_scaffold_81_3
unknown

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3135..3761
DNA (627bp) protein (209aa)
Methyltransferase type 11 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Sulfurospirillum taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
methylase involved in ubiquinone/menaquinone biosynthesis
PLM2_30_coex_sep16_scaffold_81_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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3845..4897
DNA (1053bp) protein (351aa)
Glycosyltransferase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D7Y9_SINAD
glycosyltransferase
PLM2_30_coex_sep16_scaffold_81_5
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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4909..6060
DNA (1152bp) protein (384aa)
Glycosyltransferase Tax=Oscillatoria acuminata PCC 6304 RepID=K9TM61_9CYAN
glycosyltransferase
PLM2_30_coex_sep16_scaffold_81_6
unknown

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6057..7169
DNA (1113bp) protein (371aa)
glycosyl transferase family protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glycosyltransferase
PLM2_30_coex_sep16_scaffold_81_7
unknown

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7169..8164
DNA (996bp) protein (332aa)
UPI0003D69FEC related cluster Tax=unknown RepID=UPI0003D69FEC
nucleoside-diphosphate sugar epimerase
PLM2_30_coex_sep16_scaffold_81_8
unknown

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8496..9344
DNA (849bp) protein (283aa)
Cell envelope-related function transcriptional attenuator, LytR/CpsA family bin=GWC2_Chloroflexi_73_18 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
cell envelope-related transcriptional attenuator
PLM2_30_coex_sep16_scaffold_81_9
unknown

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comp(9383..10282)
DNA (900bp) protein (300aa)
id=2457408 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_81_10
unknown

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comp(10360..11349)
DNA (990bp) protein (330aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Halorubrum coriense genus=Halorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
PLM2_30_coex_sep16_scaffold_81_11
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

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11426..12466
DNA (1041bp) protein (347aa)
Glycosyltransferase, group 2 family protein Tax=delta proteobacterium NaphS2 RepID=D8EZX0_9DELT
family 2 glycosyl transferase
PLM2_30_coex_sep16_scaffold_81_12
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

12454..15624
DNA (3171bp) protein (1057aa)
Putative uncharacterized protein Tax=Oscillochloris trichoides DG-6 RepID=E1ID80_9CHLR
PLM2_30_coex_sep16_scaffold_81_13
unknown

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15624..17702
DNA (2079bp) protein (693aa)
Putative glycosyltransferase bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_81_14
unknown

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17699..21238
DNA (3540bp) protein (1180aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_81_15
unknown

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comp(21214..22485)
DNA (1272bp) protein (424aa)
id=2457424 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_81_16
unknown

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comp(22550..23785)
DNA (1236bp) protein (412aa)
Glycosyl transferase family 2 bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
family 2 glycosyl transferase
PLM2_30_coex_sep16_scaffold_81_17
unknown

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comp(23848..25017)
DNA (1170bp) protein (390aa)
Glycosyl transferase group 1 bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
group 1 glycosyl transferase
PLM2_30_coex_sep16_scaffold_81_18
unknown

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comp(25014..26480)
DNA (1467bp) protein (489aa)
Membrane protein involved in the export of O-antigen and teichoic acid bin=GWC2_Chloroflexi_73_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
polysaccharide biosynthesis protein
PLM2_30_coex_sep16_scaffold_81_19
unknown

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comp(26511..27653)
DNA (1143bp) protein (381aa)
id=4734359 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_81_20
unknown

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comp(27653..29026)
DNA (1374bp) protein (458aa)
Membrane bound O-acyl transferase MBOAT family protein bin=GWC2_Chloroflexi_73_18 species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
poly(beta-D-mannuronate) O-acetylase
PLM2_30_coex_sep16_scaffold_81_21
unknown

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comp(29166..30077)
DNA (912bp) protein (304aa)
NAD-dependent epimerase/dehydratase bin=GWC2_Chloroflexi_73_18 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
NAD-dependent epimerase/dehydratase
PLM2_30_coex_sep16_scaffold_81_22
unknown

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comp(30140..31339)
DNA (1200bp) protein (400aa)
NAD-dependent epimerase/dehydratase bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
NAD-dependent epimerase/dehydratase
PLM2_30_coex_sep16_scaffold_81_23
unknown

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31441..32943
DNA (1503bp) protein (501aa)
hypothetical protein bin=bin5_DeltaP species=Amycolatopsis sp. ATCC 39116 genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
rhodanese-related sulfurtransferase
PLM2_30_coex_sep16_scaffold_81_24
Aestuariimicrobium kwangyangense, Aestuariimicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33089..35956
DNA (2868bp) protein (956aa)
hypothetical protein Tax=Aestuariimicrobium kwangyangense RepID=UPI0003B51DFD
hypothetical protein
PLM2_30_coex_sep16_scaffold_81_25
unknown

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36148..38601
DNA (2454bp) protein (818aa)
serine/threonine protein kinase bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
PLM2_30_coex_sep16_scaffold_81_26
unknown

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38723..39994
DNA (1272bp) protein (424aa)
putative sensor protein bin=bin8_Chloro species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
diguanylate cyclase
Displaying 26 items

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