ggKbase home page

PLM2_30_coex_sep16_scaffold_83

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_coex_sep16_scaffold_83_1
unknown

Not on your lists

1..669
DNA (669bp) protein (223aa)
recombination factor protein RarA; K07478 putative ATPase bin=bin8_Chloro species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
rarA; recombination factor protein RarA
PLM2_30_coex_sep16_scaffold_83_2
Streptomyces sp. C, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

677..1282
DNA (606bp) protein (202aa)
Putative uncharacterized protein Tax=Streptomyces sp. C RepID=D9W1I2_9ACTO
phosphohydrolase
PLM2_30_coex_sep16_scaffold_83_3
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1302..2681
DNA (1380bp) protein (460aa)
NAD-dependent aldehyde dehydrogenase Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6R1_MICTS
NAD-dependent aldehyde dehydrogenase
PLM2_30_coex_sep16_scaffold_83_4
unknown

Not on your lists

2682..3311
DNA (630bp) protein (210aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_83_5
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

3308..4693
DNA (1386bp) protein (462aa)
integral membrane protein MviN; K03980 virulence factor bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
putative peptidoglycan lipid II flippase MurJ
PLM2_30_coex_sep16_scaffold_83_6
unknown

Not on your lists

comp(4694..5608)
DNA (915bp) protein (305aa)
hypothetical protein bin=bin8_Chloro species=Arthrobacter phenanthrenivorans genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
PLM2_30_coex_sep16_scaffold_83_7
unknown

Not on your lists

5857..7056
DNA (1200bp) protein (400aa)
class V aminotransferase bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
class V aminotransferase
PLM2_30_coex_sep16_scaffold_83_8
unknown

Not on your lists

7053..8636
DNA (1584bp) protein (528aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] bin=bin8_Chloro species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
PLM2_30_coex_sep16_scaffold_83_9
unknown

Not on your lists

8606..9490
DNA (885bp) protein (295aa)
phosphoglycerate mutase family protein; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin8_Chloro organism_group=Chloroflexi
fructose-2,6-bisphosphatase
PLM2_30_coex_sep16_scaffold_83_10
unknown

Not on your lists

comp(9744..12023)
DNA (2280bp) protein (760aa)
hypothetical protein bin=bin8_Chloro species=Streptomyces somaliensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
transglutaminase domain-containing protein
PLM2_30_coex_sep16_scaffold_83_11
unknown

Not on your lists

comp(12020..13273)
DNA (1254bp) protein (418aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
PLM2_30_coex_sep16_scaffold_83_12
unknown

Not on your lists

comp(13309..14313)
DNA (1005bp) protein (335aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
ATPase
PLM2_30_coex_sep16_scaffold_83_13
unknown

Not on your lists

comp(14459..14743)
DNA (285bp) protein (95aa)
id=4802546 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_83_14
unknown

Not on your lists

comp(14740..16221)
DNA (1482bp) protein (494aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K05364 peptidoglycan glycosyltransferase [EC:2.4.1.129] bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
cell division protein FtsI
PLM2_30_coex_sep16_scaffold_83_15
unknown

Not on your lists

comp(16221..17639)
DNA (1419bp) protein (473aa)
Cell cycle protein bin=GWC2_Chloroflexi_73_18 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
cell cycle protein
PLM2_30_coex_sep16_scaffold_83_16
unknown

Not on your lists

comp(17636..18073)
DNA (438bp) protein (146aa)
Forkhead-associated protein bin=GWC2_Chloroflexi_73_18 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
FHA domain-containing protein
PLM2_30_coex_sep16_scaffold_83_17
unknown

Not on your lists

comp(18073..18885)
DNA (813bp) protein (271aa)
FHA domain-containing protein bin=bin8_Chloro species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
FHA domain-containing protein
PLM2_30_coex_sep16_scaffold_83_18
unknown

Not on your lists

19068..20753
DNA (1686bp) protein (562aa)
UPI0001925155 related cluster bin=GWC2_Chloroflexi_73_18 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
PLM2_30_coex_sep16_scaffold_83_19
unknown

Not on your lists

comp(20769..21662)
DNA (894bp) protein (298aa)
tRNA processing ribonuclease BN bin=GWC2_Chloroflexi_73_18 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ribonuclease BN
PLM2_30_coex_sep16_scaffold_83_20
unknown

Not on your lists

comp(21668..21910)
DNA (243bp) protein (81aa)
id=4591711 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_83_21
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21919..22311)
DNA (393bp) protein (131aa)
FmdB family regulatory protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UBU8_MYXSD
regulatory protein, FmdB family
PLM2_30_coex_sep16_scaffold_83_22
unknown

Not on your lists

comp(22330..23082)
DNA (753bp) protein (251aa)
id=14628683 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
PLM2_30_coex_sep16_scaffold_83_23
unknown

Not on your lists

comp(23177..24985)
DNA (1809bp) protein (603aa)
alpha-glucosidase (EC:3.2.1.-); K01187 alpha-glucosidase [EC:3.2.1.20] bin=bin8_Chloro species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
alpha-glucosidase (EC:3.2.1.-)
PLM2_30_coex_sep16_scaffold_83_24
Streptomyces sp. HmicA12, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25090..26253
DNA (1164bp) protein (388aa)
hypothetical protein Tax=Streptomyces sp. HmicA12 RepID=UPI0003677286
dehydrogenase-like protein
PLM2_30_coex_sep16_scaffold_83_25
unknown

Not on your lists

26377..27435
DNA (1059bp) protein (353aa)
Transcriptional regulator, LacI family bin=GWC2_Chloroflexi_73_18 species=Truepera radiovictrix genus=Truepera taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
LacI family transcriptional regulator
PLM2_30_coex_sep16_scaffold_83_26
unknown

Not on your lists

27511..28782
DNA (1272bp) protein (424aa)
Extracellular solute-binding protein family 1 bin=GWC2_Chloroflexi_73_18 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
family 1 extracellular solute-binding protein
PLM2_30_coex_sep16_scaffold_83_27
unknown

Not on your lists

28843..29820
DNA (978bp) protein (326aa)
ABC-type transporter, integral membrane subunit bin=GWC2_Chloroflexi_73_18 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC transporter permease
PLM2_30_coex_sep16_scaffold_83_28
unknown

Not on your lists

29817..30722
DNA (906bp) protein (302aa)
ABC-type transporter, integral membrane subunit bin=GWC2_Chloroflexi_73_18 species=Leptolyngbya sp. PCC 7375 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC transporter permease
PLM2_30_coex_sep16_scaffold_83_29
unknown

Not on your lists

comp(30799..31362)
DNA (564bp) protein (188aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_83_30
unknown

Not on your lists


comp(31563..34301)
DNA (2739bp) protein (913aa)
valS; valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] bin=bin8_Chloro species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
valyl-tRNA synthetase
Displaying items 1-30 of 33 in total

View Taxonomy