ggKbase home page

PLM2_30_coex_sep16_scaffold_258

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_coex_sep16_scaffold_258_1
unknown

Not on your lists

3..245
DNA (243bp) protein (81aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_258_2
unknown

Not on your lists

460..3024
DNA (2565bp) protein (855aa)
topA; DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2] bin=bin8_Chloro species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
DNA topoisomerase I (EC:5.99.1.2)
PLM2_30_coex_sep16_scaffold_258_3
unknown

Not on your lists

3021..3995
DNA (975bp) protein (325aa)
tyrosine recombinase XerD subunit; K03733 integrase/recombinase XerC bin=bin8_Chloro species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
tyrosine recombinase XerD
PLM2_30_coex_sep16_scaffold_258_4
unknown

Not on your lists

4014..5582
DNA (1569bp) protein (523aa)
integral membrane protein MviN; K03980 virulence factor bin=bin8_Chloro species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
integral membrane protein MviN
PLM2_30_coex_sep16_scaffold_258_5
unknown

Not on your lists

5579..6664
DNA (1086bp) protein (362aa)
FemAB family protein bin=GWC2_Chloroflexi_73_18 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
PLM2_30_coex_sep16_scaffold_258_6
unknown

Not on your lists

6661..7773
DNA (1113bp) protein (371aa)
id=3824947 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_258_7
unknown

Not on your lists

7770..9413
DNA (1644bp) protein (548aa)
UDP-N-acetylmuramyl-tripeptide synthetase bin=GWC2_Chloroflexi_73_18 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
UDP-N-acetylmuramyl tripeptide synthetase
PLM2_30_coex_sep16_scaffold_258_8
unknown

Not on your lists

9417..10118
DNA (702bp) protein (234aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_258_9
unknown

Not on your lists

10176..12446
DNA (2271bp) protein (757aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_258_10
unknown

Not on your lists

comp(12696..12917)
DNA (222bp) protein (74aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_258_11
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13094..13909)
DNA (816bp) protein (272aa)
Uncharacterized protein Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0YWJ7_9ACTO
hypothetical protein
PLM2_30_coex_sep16_scaffold_258_12
unknown

Not on your lists


14086..15372
DNA (1287bp) protein (429aa)
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] bin=bin8_Chloro species=Desulfurispora thermophila genus=Desulfurispora taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
histidyl-tRNA synthetase (EC:6.1.1.21)
PLM2_30_coex_sep16_scaffold_258_13
unknown

Not on your lists

15615..16370
DNA (756bp) protein (252aa)
id=14629294 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
PLM2_30_coex_sep16_scaffold_258_14
Actinomadura madurae, Actinomadura, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16447..17685)
DNA (1239bp) protein (413aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MRN0_9ACTO
putative FAD dependent oxidoreductase
PLM2_30_coex_sep16_scaffold_258_15
unknown

Not on your lists

17754..18344
DNA (591bp) protein (197aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_258_16
unknown

Not on your lists


18415..20295
DNA (1881bp) protein (627aa)
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
aspartyl-tRNA synthetase
PLM2_30_coex_sep16_scaffold_258_17
unknown

Not on your lists

20403..21269
DNA (867bp) protein (289aa)
hypothetical protein bin=bin8_Chloro species=Patulibacter americanus genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
PLM2_30_coex_sep16_scaffold_258_18
unknown

Not on your lists

comp(21298..22017)
DNA (720bp) protein (240aa)
Uncharacterized MobA-related protein-like protein bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
4-diphosphocytidyl-2C-methyl-D-erythritol synthase
PLM2_30_coex_sep16_scaffold_258_19
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22070..24013
DNA (1944bp) protein (648aa)
GTP-binding protein TypA/BipA Tax=Frankia sp. QA3 RepID=I9A853_9ACTO
typA; GTP-binding protein TypA
PLM2_30_coex_sep16_scaffold_258_20
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24040..24564)
DNA (525bp) protein (175aa)
Acetyltransferase, ribosomal protein N-acetylase Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9N6S4_RHILT
guaA; Guanosine monophosphate synthetase GuaA
PLM2_30_coex_sep16_scaffold_258_21
unknown

Not on your lists

24780..25964
DNA (1185bp) protein (395aa)
cysteine desulfurase NifS (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
cysteine desulfurase
Displaying 21 items

View Taxonomy