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PLM2_30_coex_sep16_scaffold_302

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_coex_sep16_scaffold_302_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3..650
DNA (648bp) protein (216aa)
Na+/H+ antiporter Tax=Pedosphaera parvula Ellin514 RepID=B9XMX7_9BACT
Na+/H+ antiporter
PLM2_30_coex_sep16_scaffold_302_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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620..1240
DNA (621bp) protein (207aa)
Na+/H+ antiporter Tax=Pedosphaera parvula Ellin514 RepID=B9XMX7_9BACT
Na+/H+ antiporter
PLM2_30_coex_sep16_scaffold_302_3
unknown

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comp(1247..2473)
DNA (1227bp) protein (409aa)
kynureninase; K01556 kynureninase [EC:3.7.1.3] bin=bin8_Chloro species=Sporichthya polymorpha genus=Sporichthya taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
kynureninase
PLM2_30_coex_sep16_scaffold_302_4
unknown

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comp(2501..3247)
DNA (747bp) protein (249aa)
hypothetical protein bin=bin8_Chloro species=Arthrobacter phenanthrenivorans genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
PLM2_30_coex_sep16_scaffold_302_5
unknown

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3440..4663
DNA (1224bp) protein (408aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase bin=GWC2_Chloroflexi_73_18 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_302_6
unknown

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comp(4689..5174)
DNA (486bp) protein (162aa)
Uncharacterized protein, possibly involved in utilization of glycolate and propanediol bin=GWC2_Chloroflexi_73_18 species=Mycobacterium chubuense genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
uncharacterized protein, possibly involved in utilization of glycolate and propanediol
PLM2_30_coex_sep16_scaffold_302_7
unknown

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comp(5167..6051)
DNA (885bp) protein (295aa)
permidine/putrescine ABC transporter inner membrane protein; K02053 putative spermidine/putrescine transport system permease protein bin=bin8_Chloro species=Ruegeria conchae genus=Ruegeria taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
binding-protein-dependent transport system inner membrane protein
PLM2_30_coex_sep16_scaffold_302_8
unknown

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comp(6131..7030)
DNA (900bp) protein (300aa)
ABC-type spermidine/putrescine transport system, permease component I bin=GWC2_Chloroflexi_73_18 species=Pseudomonas pseudoalcaligenes genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
putative polyamine ABC transporter permease protein
PLM2_30_coex_sep16_scaffold_302_9
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(7058..8266)
DNA (1209bp) protein (403aa)
Spermidine/putrescine-binding periplasmic protein Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYH4_THERP
spermidine/putrescine-binding periplasmic protein
PLM2_30_coex_sep16_scaffold_302_10
unknown

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comp(8307..9512)
DNA (1206bp) protein (402aa)
spermidine/putrescine ABC transporter ATP-binding subunit; K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31] bin=bin8_Chloro species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
spermidine/putrescine ABC transporter ATPase
PLM2_30_coex_sep16_scaffold_302_11
unknown

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9726..10313
DNA (588bp) protein (196aa)
XRE family transcriptional regulator bin=bin9_gal15 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin9_gal15 organism_group=GAL15
putative transcriptional regulator
PLM2_30_coex_sep16_scaffold_302_12
unknown

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10384..11478
DNA (1095bp) protein (365aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
putative nucleotidyl transferase bin=bin8_Chloro species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
PLM2_30_coex_sep16_scaffold_302_13
unknown

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11475..12956
DNA (1482bp) protein (494aa)
putative phosphotransferase bin=bin8_Chloro species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
phosphoglucomutase
PLM2_30_coex_sep16_scaffold_302_14
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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12953..13333
DNA (381bp) protein (127aa)
Cupin domain-containing protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MGR2_CORCM
cupin domain-containing protein
PLM2_30_coex_sep16_scaffold_302_15
unknown

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13606..13881
DNA (276bp) protein (92aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
PLM2_30_coex_sep16_scaffold_302_16
unknown

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comp(13962..14534)
DNA (573bp) protein (191aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_302_17
unknown

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comp(14531..15604)
DNA (1074bp) protein (358aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_302_18
unknown

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comp(15601..16761)
DNA (1161bp) protein (387aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_302_19
unknown

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17182..18264
DNA (1083bp) protein (361aa)
Putative ABC transporter substrate binding protein bin=GWC2_Chloroflexi_73_18 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
putative ABC transporter substrate binding protein
PLM2_30_coex_sep16_scaffold_302_20
unknown

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18282..19361
DNA (1080bp) protein (360aa)
fepD; cobalamin/Fe3+ siderophore ABC transporter permease; K02015 iron complex transport system permease protein bin=bin8_Chloro species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
btuC; cobalamin/Fe3+ siderophore ABC transporter permease, BtuC
PLM2_30_coex_sep16_scaffold_302_21
unknown

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19358..20119
DNA (762bp) protein (254aa)
ABC transporter related protein bin=GWC2_Chloroflexi_73_18 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
iron ABC transporter ATP-binding protein
PLM2_30_coex_sep16_scaffold_302_22
unknown

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20152..20808
DNA (657bp) protein (219aa)
Protein kinase family protein bin=GWC2_Chloroflexi_73_18 species=Actinomyces graevenitzii genus=Actinomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_302_23
unknown

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20845..21966
DNA (1122bp) protein (374aa)
class I/II aminotransferase bin=bin8_Chloro species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
class I/II aminotransferase
PLM2_30_coex_sep16_scaffold_302_24
Dietzia sp. UCD-THP, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(21989..22318)
DNA (330bp) protein (110aa)
hypothetical protein Tax=Dietzia sp. UCD-THP RepID=UPI000364137C
PLM2_30_coex_sep16_scaffold_302_25
Frankia sp. Iso899, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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22371..22676
DNA (306bp) protein (102aa)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B319C8
PLM2_30_coex_sep16_scaffold_302_26
unknown

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22748..23593
DNA (846bp) protein (282aa)
Putative uncharacterized protein bin=GWD2_Chloroflexi_49_16 species=Methanomethylovorans hollandica genus=Methanomethylovorans taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
PLM2_30_coex_sep16_scaffold_302_27
unknown

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23610..24491
DNA (882bp) protein (294aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_302_28
unknown

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comp(24493..25365)
DNA (873bp) protein (291aa)
glycine cleavage T protein (aminomethyl transferase); K00605 aminomethyltransferase [EC:2.1.2.10] bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
glycine cleavage T protein (aminomethyl transferase)
Displaying 28 items

View Taxonomy