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PLM2_30_coex_sep16_scaffold_953

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_coex_sep16_scaffold_953_1
Rudaea cellulosilytica, Rudaea, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..984
DNA (984bp) protein (328aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00035C6BD6
Rieske (2Fe-2S) domain-containing protein
PLM2_30_coex_sep16_scaffold_953_2
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(988..1806)
DNA (819bp) protein (273aa)
Binding-protein-dependent transport system inner membrane protein Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PTA2_MEIRD
binding-protein-dependent transport system inner membrane protein
PLM2_30_coex_sep16_scaffold_953_3
Poribacteria bacterium WGA-3G, Poribacteria, Bacteria

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comp(1822..2598)
DNA (777bp) protein (259aa)
ABC transporter permease Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B5A96B
binding-protein-dependent transport system inner membrane protein
PLM2_30_coex_sep16_scaffold_953_4
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2691..3908)
DNA (1218bp) protein (406aa)
Extracellular solute-binding protein family 1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WET1_ACTMD
family 1 extracellular solute-binding protein
PLM2_30_coex_sep16_scaffold_953_5
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(3905..5023)
DNA (1119bp) protein (373aa)
Spermidine/putrescine import ATP-binding protein PotA Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=POTA_RUBXD
spermidine/putrescine ABC transporter ATP-binding subunit
PLM2_30_coex_sep16_scaffold_953_6
unknown

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comp(5111..5878)
DNA (768bp) protein (256aa)
Conserved hypothetical membrane protein bin=GWC2_Chloroflexi_73_18 species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
diguanylate cyclase/phosphodiesterase
PLM2_30_coex_sep16_scaffold_953_7
unknown

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comp(5964..6749)
DNA (786bp) protein (262aa)
Conserved hypothetical membrane protein bin=GWC2_Chloroflexi_73_18 species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
sensor diguanylate cyclase, GAF domain-containing
PLM2_30_coex_sep16_scaffold_953_8
unknown

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6922..8205
DNA (1284bp) protein (428aa)
filamentous hemagglutinin family outer membrane protein bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
filamentous hemagglutinin family domain-containing protein
PLM2_30_coex_sep16_scaffold_953_9
unknown

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comp(8217..9134)
DNA (918bp) protein (306aa)
xthA; exodeoxyribonuclease III (EC:3.1.11.2) bin=bin8_Chloro species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
xthA; exodeoxyribonuclease III (EC:3.1.11.2)
PLM2_30_coex_sep16_scaffold_953_10
unknown

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comp(9137..9829)
DNA (693bp) protein (231aa)
amino acid-binding protein; K06862 energy-converting hydrogenase B subunit Q bin=CNBR_ACIDO species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ACT domain-containing protein
PLM2_30_coex_sep16_scaffold_953_11
unknown

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comp(9844..10107)
DNA (264bp) protein (88aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_953_12
unknown

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10172..10573
DNA (402bp) protein (134aa)
Arsenate reductase related protein bin=GWC2_Chloroflexi_73_18 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
arsenate reductase-like protein
PLM2_30_coex_sep16_scaffold_953_13
unknown

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comp(10542..10739)
DNA (198bp) protein (66aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_953_14

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10898..11200
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2ALP1_9BACT
hypothetical protein
PLM2_30_coex_sep16_scaffold_953_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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11197..12036
DNA (840bp) protein (280aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XHS4_9BACT
PLM2_30_coex_sep16_scaffold_953_16
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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12086..12973
DNA (888bp) protein (296aa)
Lysine decarboxylase family protein Tax=Frankia alni (strain ACN14a) RepID=Q0RCV0_FRAAA
lysine decarboxylase
PLM2_30_coex_sep16_scaffold_953_17
unknown

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comp(12997..13449)
DNA (453bp) protein (151aa)
Rieske (2Fe-2S) iron-sulfur domain protein bin=GWC2_Chloroflexi_73_18 species=Methanolinea tarda genus=Methanolinea taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Rieske (2Fe-2S) iron-sulfur domain-containing protein
PLM2_30_coex_sep16_scaffold_953_18
unknown

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comp(13573..15336)
DNA (1764bp) protein (588aa)
putative drug transport protein bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
EmrB/QacA subfamily drug resistance transporter
PLM2_30_coex_sep16_scaffold_953_19
unknown

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comp(15342..15863)
DNA (522bp) protein (174aa)
Transcriptional regulator bin=GWC2_Chloroflexi_73_18 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
MarR family transcriptional regulator
PLM2_30_coex_sep16_scaffold_953_20
unknown

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15941..16912
DNA (972bp) protein (324aa)
F420-dependent oxidoreductase bin=bin8_Chloro species=Gordonia paraffinivorans genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
putative F420-dependent oxidoreductase, Rv1855c family
PLM2_30_coex_sep16_scaffold_953_21
unknown

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comp(16940..18130)
DNA (1191bp) protein (397aa)
id=14629991 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
PLM2_30_coex_sep16_scaffold_953_22
unknown

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comp(18165..18521)
DNA (357bp) protein (119aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_953_23
Frankia sp. CN3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(18590..19021)
DNA (432bp) protein (144aa)
superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase, Ni Tax=Frankia sp. CN3 RepID=G6HM90_9ACTO
PLM2_30_coex_sep16_scaffold_953_24
unknown

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19346..20254
DNA (909bp) protein (303aa)
SPFH domain / Band 7 family, putative bin=GWF2_OP3_38_59 species=Synechococcus sp. PCC 7335 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
hypothetical protein
PLM2_30_coex_sep16_scaffold_953_25
unknown

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20318..21547
DNA (1230bp) protein (410aa)
peptidoglycan-binding LysM bin=bin8_Chloro species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
putative lysozyme
PLM2_30_coex_sep16_scaffold_953_26
unknown

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21653..22558
DNA (906bp) protein (302aa)
Selenocysteine lyase / isopenicillin N epimerase bin=GWF2_Methylomirabilis_70_14 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cefD; isopenicillin N epimerase
Displaying 26 items

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