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PLM2_30_coex_sep16_scaffold_1282_16

Organism: PLM2_30_coex_sep16_Chloroflexi_RIF-CHLX_69_20

near complete RP 43 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38 MC: 1
Location: comp(14197..14772)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin8_Chloro species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 39.9
  • Coverage: 173.0
  • Bit_score: 117
  • Evalue 1.00e-23
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 168.0
  • Bit_score: 95
  • Evalue 1.20e-17

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 576
CCGATCCGCTCGCCGGGGACACTCATCGGCATGGAGGCCGTCCTGGAGCAGTCGCCGCCGACCCTCGCCGGACTCGTCGCCGCCGCGAAGCGGGGCGACCGCGACGCGTTCCGGGAACTCGTCGAGCCGGACCTGGCGGCCGCGCTCGGGACCGCCCGGATCGTCACCCGCTCGGAAGCCGACGCCTCGGACGCGGTTCAGGACGCTCTCCTCTCCGCCTGGCGCGGCCTCGACTCGCTCCGCGACCCGGACGCATTCCGTGCCTGGTTCCGGCGCCACGTCGTCCGGGCGGCGCTCAAAGGCGCGGAGCGGCGCGGGCGGGTCGTCGAGCTCGACCTCGCCGCGGCCGCGCCGGAGGGTGAGCTCGATCGCGCGCTCGATGCACGAACCCTGGCCCGCGCCTTCGACCGGCTCGAAGCCCGCGACCGCCTCCTCCTGACGCTCCACCACTTCTGGGACCTGCCGATCGCGGAGACAGCCGCGCATCTGGGCATCCCCGAGGGCACCGTCAAGTCGCGGGTCCACTACGCGATGGACCGACTCCGGGCCGCCTTCGCGGCGGAGGAACGACGATGA
PROTEIN sequence
Length: 192
PIRSPGTLIGMEAVLEQSPPTLAGLVAAAKRGDRDAFRELVEPDLAAALGTARIVTRSEADASDAVQDALLSAWRGLDSLRDPDAFRAWFRRHVVRAALKGAERRGRVVELDLAAAAPEGELDRALDARTLARAFDRLEARDRLLLTLHHFWDLPIAETAAHLGIPEGTVKSRVHYAMDRLRAAFAAEERR*