ggKbase home page

PLM2_30_coex_sep16_scaffold_1282

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_coex_sep16_scaffold_1282_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3..362)
DNA (360bp) protein (120aa)
sulfate adenylyltransferase, small subunit (EC:2.7.7.4)
Sulfate adenylyltransferase, small subunit Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0K6_CONWI
PLM2_30_coex_sep16_scaffold_1282_2
Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(359..1156)
DNA (798bp) protein (266aa)
Putative PAPS reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIP3_NITGG
PAPS reductase
PLM2_30_coex_sep16_scaffold_1282_3
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1143..2036)
DNA (894bp) protein (298aa)
Binding-protein-dependent transport systems inner membrane component Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EGS3_AMYSD
binding-protein-dependent transport system inner membrane protein
PLM2_30_coex_sep16_scaffold_1282_4
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2023..2823)
DNA (801bp) protein (267aa)
ABC transporter, ATPase subunit Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BCS5_STRRD
ABC transporter ATPase
PLM2_30_coex_sep16_scaffold_1282_5
Micromonospora sp., Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2820..3938)
DNA (1119bp) protein (373aa)
Aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein Tax=Micromonospora sp. (strain L5) RepID=E8SB35_MICSL
aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein
PLM2_30_coex_sep16_scaffold_1282_6
unknown

Not on your lists

comp(4056..4529)
DNA (474bp) protein (158aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_1282_trna_2
unknown

Not on your lists

comp(4565..4637)
DNA (73bp)
transferRNA Arg
PLM2_30_coex_sep16_scaffold_1282_trna_1
unknown

Not on your lists

comp(4660..4748)
DNA (89bp)
transferRNA Ser
PLM2_30_coex_sep16_scaffold_1282_7
unknown

Not on your lists

4840..5466
DNA (627bp) protein (209aa)
hypothetical protein bin=bin8_Chloro species=Geobacillus thermodenitrificans genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
PLM2_30_coex_sep16_scaffold_1282_8
unknown

Not on your lists

5645..6745
DNA (1101bp) protein (367aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase bin=GWC2_Chloroflexi_73_18 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_1282_9
unknown

Not on your lists

6742..8124
DNA (1383bp) protein (461aa)
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin8_Chloro organism_group=Chloroflexi
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
PLM2_30_coex_sep16_scaffold_1282_10
unknown

Not on your lists

8121..9149
DNA (1029bp) protein (343aa)
Shikimate dehydrogenase AroE bin=GWC2_Chloroflexi_73_18 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
shikimate 5-dehydrogenase
PLM2_30_coex_sep16_scaffold_1282_11
unknown

Not on your lists

9166..10443
DNA (1278bp) protein (426aa)
Chorismate synthase bin=GWC2_Chloroflexi_73_18 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
chorismate synthase
PLM2_30_coex_sep16_scaffold_1282_12
unknown

Not on your lists

10448..12136
DNA (1689bp) protein (563aa)
aroK_aroB; shikimate kinase/3-dehydroquinate synthase (EC:2.7.1.71 4.2.3.4)
Shikimate kinase / 3-dehydroquinate synthase bin=GWC2_Chloroflexi_73_18 species=unknown genus=Gluconacetobacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_1282_13
unknown

Not on your lists

12133..12576
DNA (444bp) protein (148aa)
aroQ; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
PLM2_30_coex_sep16_scaffold_1282_14
unknown

Not on your lists

12569..12883
DNA (315bp) protein (105aa)
chorismate mutase bin=bin8_Chloro species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
chorismate mutase, clade 2
PLM2_30_coex_sep16_scaffold_1282_15
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12890..14200)
DNA (1311bp) protein (437aa)
Uncharacterized protein Tax=Streptomyces collinus Tu 365 RepID=S5V135_STRCU
hypothetical protein
PLM2_30_coex_sep16_scaffold_1282_16
unknown

Not on your lists

comp(14197..14772)
DNA (576bp) protein (192aa)
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin8_Chloro species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=bin8_Chloro organism_group=Chloroflexi
ECF subfamily RNA polymerase sigma-24 factor
Displaying 18 items

View Taxonomy