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PLM2_30_coex_sep16_scaffold_409_20

Organism: PLM2_30_coex_sep16_Chloroflexi_RIF-CHLX_69_20

near complete RP 43 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38 MC: 1
Location: 20097..21380

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin8_Chloro species=Actinomadura madurae genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 422.0
  • Bit_score: 553
  • Evalue 1.30e-154
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 415.0
  • Bit_score: 487
  • Evalue 3.20e-135

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Notes

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 1284
TTGGCTCCGCCGACCGATCCGCATGCCGTCGTCGACCGCCTCTTCCGCGAGGAGCAGGGGCGAGCCGTCGCCACGCTCATCCGCGTCCTCGGCGACTTCGATCTCGCCGAGGAGGCGGTCCAGGAAGCGTTCGTCACGGCCCTCGAAACGTGGCCGTCGCGAGGCGTCCCGGACAATCCCGGCGCCTGGATCACTACGACGGCGCGCAACCGGGCGATCGATCGGCTCCGCCGCCGCAAGCGGCTGGCCGAGAAGCAGGAGCTCCTCCAGCGCGAGGCGGCGATCGCGGACGAGCTCGCGGCGATCGACCCGGACGCGGCCATCGACGGGGAAACCGGCATGAGTCCGATCGCCGACGATCGGTTGCGGCTGATCTTCACCTGCTGCCACCCGGCACTCGCGATGGATGCTCGGGTCGCCCTGACGCTTCGGACGCTCGGCGGCCTCTCGACGCCGGAGATCGCCCGCGCCTTCCTCGTGCCGGAGCCGACGCTCGCCCAGCGGCTGGTGCGGGCGAAGCGAAAGATCCGCGACGCGGGCATTCCGTATCGCGTCCCGCCCGATCACGCCCTGCCGGAGCGCCTCGACGGCGTCCTGCGGGTTCTCTACCTCGTCTTCAACGAGGGCTATGGGGCGACGTCCGGGGATCGACTCGTCCGCCGCGAGCTGTGCGCAGAGGCGATCCGGCTGGCCCGTGTCCTGGTCTCGCTGATGCCGGATGAACCGGAGGCGCTCGGGTTGCTCGCGCTGATGCTCCTGCACGACGCGCGGCGGGAGGCGCGGACCGGTCCCGGCGGCGAGATGATCCTGCTCGAGGACCAGGATCGCGATCGCTGGGACCGGGCCAAGGTCGACGAAGGGCGGGAGCTGCTCGAACGGGCGCTCAGGATGCGGCGCGTCGGGCCCAACCAGCTCCAGGCGGCGATTGCGGCACTCCACGACGACGCGGCCACGGCCAACGAGACGGACTGGGCCCAGATCGCGGGCCTGTACGCGGTCCTTGGTCGCGTGGCTCCCTCACCGGTCATCGAGCTCAACCGGGCGGTCGCGGTCGCGATGGCATCGGGGCCGGAGCTCGGGCTGCAGCTCGTCGATGCGGTCGCCGCCTCCGGGCAGCTCGAGGAGTATCCGTATCTTCATGCCGCCAGGGCCGACCTTCTCCGTCGACTCGGGAGGCTTCCCGAGGCCGCCGACGCCTATTCCCGGGCACGCGACCTGACAGCCAACGAGCAGGAGCGGGCGTTCCTGGACCGGCGCCTGACCGAGGTCGGCGCGCGCAGCTAA
PROTEIN sequence
Length: 428
LAPPTDPHAVVDRLFREEQGRAVATLIRVLGDFDLAEEAVQEAFVTALETWPSRGVPDNPGAWITTTARNRAIDRLRRRKRLAEKQELLQREAAIADELAAIDPDAAIDGETGMSPIADDRLRLIFTCCHPALAMDARVALTLRTLGGLSTPEIARAFLVPEPTLAQRLVRAKRKIRDAGIPYRVPPDHALPERLDGVLRVLYLVFNEGYGATSGDRLVRRELCAEAIRLARVLVSLMPDEPEALGLLALMLLHDARREARTGPGGEMILLEDQDRDRWDRAKVDEGRELLERALRMRRVGPNQLQAAIAALHDDAATANETDWAQIAGLYAVLGRVAPSPVIELNRAVAVAMASGPELGLQLVDAVAASGQLEEYPYLHAARADLLRRLGRLPEAADAYSRARDLTANEQERAFLDRRLTEVGARS*