ggKbase home page

PLM2_30_coex_sep16_scaffold_409

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_coex_sep16_scaffold_409_1
unknown

Not on your lists

comp(141..413)
DNA (273bp) protein (91aa)
id=4110418 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_409_2
unknown

Not on your lists

comp(471..1550)
DNA (1080bp) protein (360aa)
id=4110417 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
peptidase S8
PLM2_30_coex_sep16_scaffold_409_3
unknown

Not on your lists

1948..2226
DNA (279bp) protein (93aa)
id=14629582 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
PLM2_30_coex_sep16_scaffold_409_4
unknown

Not on your lists

2223..3572
DNA (1350bp) protein (450aa)
folylpolyglutamate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] bin=bin8_Chloro species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
PLM2_30_coex_sep16_scaffold_409_5
unknown

Not on your lists

3671..4492
DNA (822bp) protein (274aa)
folP; dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_409_6
unknown

Not on your lists

4516..4869
DNA (354bp) protein (118aa)
dihydroneopterin aldolase; K01633 dihydroneopterin aldolase [EC:4.1.2.25] bin=bin8_Chloro species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
dihydroneopterin aldolase
PLM2_30_coex_sep16_scaffold_409_7
unknown

Not on your lists

comp(4890..6233)
DNA (1344bp) protein (448aa)
2-alkenal reductase; K08070 2-alkenal reductase [EC:1.3.1.74] bin=bin8_Chloro species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
2-alkenal reductase (EC:1.3.1.74)
PLM2_30_coex_sep16_scaffold_409_8
unknown

Not on your lists

comp(6294..7922)
DNA (1629bp) protein (543aa)
two-component sensor histidine kinase bin=bin8_Chloro species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
histidine kinase
PLM2_30_coex_sep16_scaffold_409_9
unknown

Not on your lists

comp(7942..8640)
DNA (699bp) protein (233aa)
two component transcriptional regulator bin=bin8_Chloro species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
PLM2_30_coex_sep16_scaffold_409_10
unknown

Not on your lists


8791..9498
DNA (708bp) protein (236aa)
50S ribosomal protein L25 bin=GWC2_Chloroflexi_73_18 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
50S ribosomal protein L25
PLM2_30_coex_sep16_scaffold_409_11
unknown

Not on your lists

comp(9502..10323)
DNA (822bp) protein (274aa)
Methylase involved in ubiquinone/menaquinone biosynthesis bin=GWC2_Chloroflexi_73_18 species=Microvirga sp. WSM3557 genus=Microvirga taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
UbiE/COQ5 family methyltransferase
PLM2_30_coex_sep16_scaffold_409_12
unknown

Not on your lists

comp(10356..11294)
DNA (939bp) protein (313aa)
hypothetical protein bin=bin8_Chloro species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
lipoprotein
PLM2_30_coex_sep16_scaffold_409_13
unknown

Not on your lists

11481..13001
DNA (1521bp) protein (507aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
PLM2_30_coex_sep16_scaffold_409_14
unknown

Not on your lists

12944..14119
DNA (1176bp) protein (392aa)
ligC; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] bin=bin8_Chloro species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
ligC; ATP-dependent DNA ligase
PLM2_30_coex_sep16_scaffold_409_15
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14134..14793
DNA (660bp) protein (220aa)
FMN-binding negative transcriptional regulator Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y603_THEBD
FMN-binding negative transcriptional regulator
PLM2_30_coex_sep16_scaffold_409_16
Rhizobium sp. 2MFCol3.1, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14797..16026)
DNA (1230bp) protein (410aa)
putative adenylate/guanylate cyclase (EC:4.6.1.2)
hypothetical protein Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035C15D7
PLM2_30_coex_sep16_scaffold_409_17
Acidobacteriaceae bacterium TAA166, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16023..17495)
DNA (1473bp) protein (491aa)
DNA polymerase LigD Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B35DA5
putative DNA primase
PLM2_30_coex_sep16_scaffold_409_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17524..19458)
DNA (1935bp) protein (645aa)
Putative potassium/hydrogen antiporter Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABP3_GEMAT
putative potassium/hydrogen antiporter
PLM2_30_coex_sep16_scaffold_409_19
unknown

Not on your lists

19688..20077
DNA (390bp) protein (130aa)
hypothetical protein bin=bin8_Chloro species=Bradyrhizobium sp. genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
PLM2_30_coex_sep16_scaffold_409_20
unknown

Not on your lists

20097..21380
DNA (1284bp) protein (428aa)
RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin8_Chloro species=Actinomadura madurae genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
RNA polymerase sigma factor, sigma-70 family
PLM2_30_coex_sep16_scaffold_409_21
unknown

Not on your lists

21438..22166
DNA (729bp) protein (243aa)
id=4213268 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_409_22
unknown

Not on your lists

comp(22188..22343)
DNA (156bp) protein (52aa)
transcriptional regulatory protein degU
Two component transcriptional regulator, LuxR family bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Displaying 22 items

View Taxonomy