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PLM2_30_coex_sep16_scaffold_580

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_coex_sep16_scaffold_580_1
GWC1_CPR2_39_9, CPR2, Bacteria

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comp(3..149)
DNA (147bp) protein (49aa)
glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase bin=GWC1_CPR2_39_9 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
PLM2_30_coex_sep16_scaffold_580_2
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(220..624)
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YDG7_MESOW
hypothetical protein
PLM2_30_coex_sep16_scaffold_580_3
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(621..1838)
DNA (1218bp) protein (406aa)
Uncharacterized protein Tax=Burkholderia sp. SJ98 RepID=K8R5Y0_9BURK
predicted aconitase subunit 1
PLM2_30_coex_sep16_scaffold_580_4
unknown

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comp(1907..2359)
DNA (453bp) protein (151aa)
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.26); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] bin=bin8_Chloro species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin8_Chloro organism_group=Chloroflexi
rpiB; ribose 5-phosphate isomerase B (EC:5.3.1.6)
PLM2_30_coex_sep16_scaffold_580_5
unknown

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comp(2367..2972)
DNA (606bp) protein (202aa)
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Sua5/YciO/YrdC/YwlC family protein
PLM2_30_coex_sep16_scaffold_580_6
unknown

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comp(2976..3902)
DNA (927bp) protein (309aa)
protein-(glutamine-N5) methyltransferase (EC:2.1.1.72); K02493 release factor glutamine methyltransferase [EC:2.1.1.-] bin=bin8_Chloro species=Desulfurispora thermophila genus=Desulfurispora taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
HemK family modification methylase
PLM2_30_coex_sep16_scaffold_580_7
unknown

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comp(3889..4968)
DNA (1080bp) protein (360aa)
peptide chain release factor 1; K02835 peptide chain release factor 1 bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
prfA; peptide chain release factor 1
PLM2_30_coex_sep16_scaffold_580_8
unknown

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comp(4965..5996)
DNA (1032bp) protein (344aa)
hypothetical protein bin=bin8_Chloro species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
PLM2_30_coex_sep16_scaffold_580_9
unknown

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comp(5998..6210)
DNA (213bp) protein (71aa)
50S ribosomal protein L31 bin=GWC2_Chloroflexi_73_18 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
rpmE; 50S ribosomal protein L31
PLM2_30_coex_sep16_scaffold_580_10
unknown

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comp(6239..6508)
DNA (270bp) protein (90aa)
50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 bin=bin8_Chloro species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
LSU ribosomal protein L27P
PLM2_30_coex_sep16_scaffold_580_11
unknown

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comp(6515..7024)
DNA (510bp) protein (170aa)
50S ribosomal protein L21 (EC:2.3.1.61)
50S ribosomal protein L21 Tax=Puniceispirillum marinum (strain IMCC1322) RepID=D5BMQ6_PUNMI
PLM2_30_coex_sep16_scaffold_580_12
unknown

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comp(7127..7840)
DNA (714bp) protein (238aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
hypothetical protein
PLM2_30_coex_sep16_scaffold_580_13
unknown

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comp(7864..9000)
DNA (1137bp) protein (379aa)
rod shape-determining protein RodA; K05837 rod shape determining protein RodA bin=bin8_Chloro species=unknown genus=Megamonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
rodA; rod shape-determining protein roda
PLM2_30_coex_sep16_scaffold_580_14
unknown

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comp(9004..10908)
DNA (1905bp) protein (635aa)
penicillin-binding protein 2 (EC:2.4.1.129)
Penicillin-binding protein 2 bin=GWC2_Chloroflexi_73_18 species=Selenomonas infelix genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_580_15
unknown

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comp(10915..11358)
DNA (444bp) protein (148aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_580_16
unknown

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11615..12376
DNA (762bp) protein (254aa)
ParA family ATPase
ParA, ParA family ATPase bin=GWC2_Chloroflexi_73_18 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_580_17
unknown

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12369..13226
DNA (858bp) protein (286aa)
Putative chromosome-partitioning protein parB bin=GWC2_Chloroflexi_73_18 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
parB-like partition protein
PLM2_30_coex_sep16_scaffold_580_18
unknown

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13223..15202
DNA (1980bp) protein (660aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
DNA gyrase subunit B (EC:5.99.1.3)
PLM2_30_coex_sep16_scaffold_580_19
unknown

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15223..15471
DNA (249bp) protein (83aa)

This feature has no annotations

PLM2_30_coex_sep16_scaffold_580_20
unknown

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15468..16004
DNA (537bp) protein (179aa)
Thioesterase family protein bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
thioesterase family protein
PLM2_30_coex_sep16_scaffold_580_21
unknown

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16051..18570
DNA (2520bp) protein (840aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
DNA gyrase subunit A (EC:5.99.1.3)
PLM2_30_coex_sep16_scaffold_580_22
unknown

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18602..19636
DNA (1035bp) protein (345aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase bin=GWC2_Chloroflexi_73_18 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PLM2_30_coex_sep16_scaffold_580_23
Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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19684..19950
DNA (267bp) protein (89aa)
Protein translocase subunit SecA Tax=Chloroflexus RepID=SECA_CHLAA
preprotein translocase subunit SecA
Displaying 23 items

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