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PLM2_30_coex_sep16_scaffold_4393

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_30_coex_sep16_scaffold_4393_1
Desulfurispora thermophila, Desulfurispora, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..261)
DNA (261bp) protein (87aa)
50S ribosomal protein L6 Tax=Desulfurispora thermophila RepID=UPI00037840C5
rplF; 50S ribosomal protein L6
PLM2_30_coex_sep16_scaffold_4393_2
unknown

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comp(623..808)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z bin=GWC2_Chloroflexi_73_18 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
30S ribosomal protein S14
PLM2_30_coex_sep16_scaffold_4393_3
unknown

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comp(820..1467)
DNA (648bp) protein (216aa)
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
rplE; 50S ribosomal protein L5
PLM2_30_coex_sep16_scaffold_4393_4
unknown

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comp(1464..1793)
DNA (330bp) protein (110aa)
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 bin=bin8_Chloro species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
50S ribosomal protein L24
PLM2_30_coex_sep16_scaffold_4393_5
unknown

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comp(1795..2163)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
50S ribosomal protein L14
PLM2_30_coex_sep16_scaffold_4393_6
unknown

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comp(2160..2435)
DNA (276bp) protein (92aa)
30S ribosomal protein S17 bin=GWC2_Chloroflexi_73_18 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
rpsQ; 30S ribosomal protein S17
PLM2_30_coex_sep16_scaffold_4393_7
unknown

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comp(2435..2659)
DNA (225bp) protein (75aa)
50S ribosomal protein L29 bin=GWC2_Chloroflexi_73_18 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
50S ribosomal protein L29
PLM2_30_coex_sep16_scaffold_4393_8
unknown

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comp(2659..3072)
DNA (414bp) protein (138aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 bin=bin8_Chloro species=Brevibacillus sp. phR genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
50S ribosomal protein L16
PLM2_30_coex_sep16_scaffold_4393_9
unknown

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comp(3075..3824)
DNA (750bp) protein (250aa)
rpsC; 30S ribosomal protein S3 bin=bin8_Chloro species=unknown genus=Lactobacillus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
rpsC; 30S ribosomal protein S3
PLM2_30_coex_sep16_scaffold_4393_10
unknown

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comp(3824..4165)
DNA (342bp) protein (114aa)
50S ribosomal protein L22 bin=bin8_Chloro species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
rplV; 50S ribosomal protein L22
PLM2_30_coex_sep16_scaffold_4393_11
unknown

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comp(4177..4461)
DNA (285bp) protein (95aa)
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 bin=bin8_Chloro species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
30S ribosomal protein S19
PLM2_30_coex_sep16_scaffold_4393_12
unknown

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comp(4471..5256)
DNA (786bp) protein (262aa)
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 bin=bin8_Chloro species=Desulfurispora thermophila genus=Desulfurispora taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
50S ribosomal protein L2
PLM2_30_coex_sep16_scaffold_4393_13
unknown

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comp(5307..5603)
DNA (297bp) protein (99aa)
50S ribosomal protein L25; K02892 large subunit ribosomal protein L23 bin=bin8_Chloro species=Thermanaerovibrio acidaminovorans genus=Thermanaerovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=bin8_Chloro organism_group=Chloroflexi
LSU ribosomal protein L23P
PLM2_30_coex_sep16_scaffold_4393_14
unknown

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comp(5600..6223)
DNA (624bp) protein (208aa)
50S ribosomal protein L4 bin=GWC2_Chloroflexi_73_18 species=Bacillus alcalophilus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
50S ribosomal protein L4
PLM2_30_coex_sep16_scaffold_4393_15
unknown

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comp(6226..6849)
DNA (624bp) protein (208aa)
50S ribosomal protein L3 bin=GWC2_Chloroflexi_73_18 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
50S ribosomal protein L3
PLM2_30_coex_sep16_scaffold_4393_16
unknown

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comp(6869..7177)
DNA (309bp) protein (103aa)
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 bin=bin8_Chloro species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
rpsJ; 30S ribosomal protein S10
PLM2_30_coex_sep16_scaffold_4393_17
unknown

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comp(7185..8387)
DNA (1203bp) protein (401aa)
tuf; elongation factor Tu (EC:3.6.5.3)
translation elongation factor tu (EC:2.7.7.4); K02358 elongation factor Tu bin=bin8_Chloro species=Caldicellulosiruptor owensensis genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
PLM2_30_coex_sep16_scaffold_4393_18
unknown

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comp(8409..8735)
DNA (327bp) protein (109aa)
fusA; elongation factor G; K02355 elongation factor G bin=bin8_Chloro species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
translation elongation factor G
Displaying 18 items

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