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PLM2_5_b1_sep16_scaffold_4

Search features with annotation key words

Displaying items 31-60 of 233 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_4_31
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34366..34785)
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GTN7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR95197.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
PLM2_5_b1_sep16_scaffold_4_32
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34782..35270)
DNA (489bp) protein (163aa)
hypothetical protein Tax=Hymenobacter norwichensis RepID=UPI0003B69BEC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII54209.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
PLM2_5_b1_sep16_scaffold_4_33
Bacillus niacini, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(35272..35676)
DNA (405bp) protein (135aa)
Putative uncharacterized protein Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WK92_9BACI
Phosphoglycerate mutase {ECO:0000313|EMBL:KGM45695.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus niacini.;"
phosphoglycerate mutase
PLM2_5_b1_sep16_scaffold_4_34
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35882..37177)
DNA (1296bp) protein (432aa)
hypothetical protein Tax=Hymenobacter aerophilus RepID=UPI00036AB63F
putative membrane-bound metal-dependent hydrolase
Membrane protein {ECO:0000313|EMBL:KFF33297.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA01.;"
PLM2_5_b1_sep16_scaffold_4_35
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(37187..37996)
DNA (810bp) protein (270aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003654449
peptidase S1 and S6 chymotrypsin/Hap
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:AHG93611.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_4_36
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(38010..39524)
DNA (1515bp) protein (505aa)
Periplasmic component of the Tol biopolymer transport system-like protein Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDG2_RHOM4
WD40-like beta Propeller containing protein
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:AHG88938.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_4_37
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39530..40039)
DNA (510bp) protein (170aa)
Uncharacterized protein Tax=Sulfobacillus acidophilus RepID=F8I524_SULAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03807.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL).;"
PLM2_5_b1_sep16_scaffold_4_38
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(40093..40482)
DNA (390bp) protein (130aa)
Putative fluoride ion transporter CrcB Tax=Shinella zoogloeoides DD12 RepID=V5CSV5_9RHIZ
camphor resistance protein CrcB
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM2_5_b1_sep16_scaffold_4_39
unknown

Not on your lists

comp(40717..41109)
DNA (393bp) protein (131aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_4_40
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(41128..41574)
DNA (447bp) protein (149aa)
Hemoglobin-like protein HbN (Modular protein) Tax=Candidatus Nitrospira defluvii RepID=D8P7L8_9BACT
glbN; hemoglobin-like protein HBN
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_4_41
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41644..42711)
DNA (1068bp) protein (356aa)
Peptidase S41 family Tax=Paraprevotella clara CAG:116 RepID=R5N8M2_9BACT
Peptidase S41 family {ECO:0000313|EMBL:CCZ00435.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
peptidase S41
PLM2_5_b1_sep16_scaffold_4_42
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(42708..43199)
DNA (492bp) protein (164aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB72_GEMAT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_4_43
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43196..43621)
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SH52_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB49853.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
PLM2_5_b1_sep16_scaffold_4_44
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(43621..44205)
DNA (585bp) protein (195aa)
aromatic acid decarboxylase (EC:4.1.1.-)
Aromatic acid decarboxylase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB74_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_4_45
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(44202..45479)
DNA (1278bp) protein (426aa)
alpha-L-fucosidase (EC:3.2.1.51)
hypothetical protein Tax=Spirosoma panaciterrae RepID=UPI0003802167
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_4_46
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(45580..46515)
DNA (936bp) protein (312aa)
4-hydroxybenzoate octaprenyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB75_GEMAT
4-hydroxybenzoate polyprenyltransferase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_4_47
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(46505..47980)
DNA (1476bp) protein (492aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB76_GEMAT
menaquinone biosynthesis decarboxylase, SCO4490 family
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_4_48
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(47967..48626)
DNA (660bp) protein (220aa)
ubiE; menaquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-)
Demethylmenaquinone methyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB77_GEMAT
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_4_49
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

48721..49278
DNA (558bp) protein (186aa)
RNA polymerase sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB78_GEMAT
RNA polymerase sigma factor, sigma-70 family
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_4_50
unknown

Not on your lists

49314..49556
DNA (243bp) protein (81aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_4_51
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(49611..50357)
DNA (747bp) protein (249aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB82_GEMAT
protein of unknown function DUF62
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_4_52
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(50344..51660)
DNA (1317bp) protein (439aa)
Putative multidrug resistance protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB83_GEMAT
MATE efflux family protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_4_53
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(51657..52406)
DNA (750bp) protein (250aa)
hypothetical protein bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_4_54
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(52408..53463)
DNA (1056bp) protein (352aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB84_GEMAT
ATPase-like, ParA/MinD
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_4_55
unknown

Not on your lists

53585..53980
DNA (396bp) protein (132aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_4_56
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

53994..55463
DNA (1470bp) protein (490aa)
Peptidase, M20E (Gly-X carboxypeptidase) subfamily Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DA13_MYXXD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_4_57
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(55460..56500)
DNA (1041bp) protein (347aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB85_GEMAT
phosphoesterase RecJ domain protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_4_58
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(56518..58017)
DNA (1500bp) protein (500aa)
amino acid/polyamine/organocation transporter, APC superfamily
Amino acid/polyamine/organocation transporter, APC superfamily bin=GWF2_Bacteroidetes_40_14 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_4_59
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58093..58878)
DNA (786bp) protein (262aa)
Uncharacterized protein Tax=Asticcacaulis sp. AC466 RepID=V4NJJ4_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ82007.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
LytTr DNA-binding region
PLM2_5_b1_sep16_scaffold_4_60
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(58915..60369)
DNA (1455bp) protein (485aa)
Putative uncharacterized protein bin=GWA2_Bacteroidetes_42_15 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
amino acid permease-associated region
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying items 31-60 of 233 in total

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