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PLM2_5_b1_sep16_scaffold_4_49

Organism: PLM2_5_b1_sep16_Gemmatimonadetes_67_22

near complete RP 53 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 48721..49278

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB78_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 182.0
  • Bit_score: 263
  • Evalue 1.50e-67
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 182.0
  • Bit_score: 264
  • Evalue 1.90e-68
Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 182.0
  • Bit_score: 270
  • Evalue 1.00e-69

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 558
GTGGCGTGGGCAAAGCAAGGCCACGAGGCCGCGTTCCGCGAGCTCGTGCGCCGTTACGAGCGCCCGGTCTTCTCGCTCTTATATCGGATGGTGCGCGATCGCGCGCTCGCCGAGGATTTGGCGCAAGAGACGTTCATTAAAGTGCTCAACGGCATCAAGTCGTATCGCCCCGAGTTCAAGTTCTCGTCGTGGATCTTCAAGATCGCGAACAACGCGGCGATCGATCATCTGCGAAAAAAGAGTCTCGATACCCTGTCGCTCGACGGCTCGCCCTCGGCCGAGACGCCGGAGCAGATGCGGGCGACTTCGCTGCAGCTGGGCGACAAGAGCGAAACGCCTCTCGACGAGGTCGAAAGCCGCGAGCTGGGCACCGCGATCGAAAAGGCGATCTCGCGACTGCGGCCGGAGTACCGCTCCTGCATCCTGCTGCGCCACGTGGAGGGGTATTCCTACGAGGAAATCGCCGAGAGCCTGGAGTTACCGCTTGGAACCGTGAAGACGTATATCCATCGGGCCCGCAACGAATTGCGGGTTTATCTCGAAGACCGCAGGGAGTGA
PROTEIN sequence
Length: 186
VAWAKQGHEAAFRELVRRYERPVFSLLYRMVRDRALAEDLAQETFIKVLNGIKSYRPEFKFSSWIFKIANNAAIDHLRKKSLDTLSLDGSPSAETPEQMRATSLQLGDKSETPLDEVESRELGTAIEKAISRLRPEYRSCILLRHVEGYSYEEIAESLELPLGTVKTYIHRARNELRVYLEDRRE*