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PLM2_5_b1_sep16_scaffold_33

Search features with annotation key words

Displaying items 1-30 of 236 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_33_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(32..349)
DNA (318bp) protein (106aa)
50S ribosomal protein L21 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A931_GEMAT
50S ribosomal protein L21
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_33_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(384..1976)
DNA (1593bp) protein (531aa)
cafA; ribonuclease G (EC:3.1.-.-)
Ribonuclease G Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A932_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_33_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2150..3370)
DNA (1221bp) protein (407aa)
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:BAH38743.1}; EC=1.3.99.- {ECO:0000313|EMBL:BAH38743.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Acyl-CoA dehydrogenase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A933_GEMAT
PLM2_5_b1_sep16_scaffold_33_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3383..4510)
DNA (1128bp) protein (376aa)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:BAH38744.1}; EC=3.6.1.- {ECO:0000313|EMBL:BAH38744.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
ATP-dependent DNA helicase RecQ Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A934_GEMAT
PLM2_5_b1_sep16_scaffold_33_5
Nostoc sp. PCC 7107, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

4609..6711
DNA (2103bp) protein (701aa)
prolyl oligopeptidase (EC:3.4.21.26)
Prolyl oligopeptidase {ECO:0000313|EMBL:AFY42239.1}; EC=3.4.21.26 {ECO:0000313|EMBL:AFY42239.1};; Flags: Precursor;; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. PCC 7107.;"
prolyl endopeptidase Tax=Chlorogloeopsis RepID=UPI000300DF20
PLM2_5_b1_sep16_scaffold_33_6
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

6720..7463
DNA (744bp) protein (248aa)
hypothetical protein bin=RBG_16_Aminicenantes_63_14 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
PF06210 family protein
Tax=RBG_16_Aminicenantes_63_16_curated
PLM2_5_b1_sep16_scaffold_33_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7970..8287)
DNA (318bp) protein (106aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_33_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8280..8642)
DNA (363bp) protein (121aa)
Chaperonin, 10 kDa Tax=uncultured marine bacterium Ant4D5 RepID=Q2PXZ9_9BACT
Chaperonin Cpn10
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_33_9

Not on your lists

8825..10039
DNA (1215bp) protein (405aa)
Uncharacterized protein Tax=uncultured bacterium RepID=Q84CW3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AAO91891.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM2_5_b1_sep16_scaffold_33_10

Not on your lists

10039..10794
DNA (756bp) protein (252aa)
Uncharacterized protein Tax=uncultured bacterium RepID=Q84CW4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AAO91890.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM2_5_b1_sep16_scaffold_33_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10791..11225)
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC79_GEMAT
protein of unknown function DUF1094
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_33_12
unknown

Not on your lists

comp(11218..11394)
DNA (177bp) protein (59aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_33_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(11391..12149)
DNA (759bp) protein (253aa)
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:CDM64423.1}; EC=4.2.1.18 {ECO:0000313|EMBL:CDM64423.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
enoyl-CoA hydratase/carnithine racemase (EC:4.2.1.17)
Enoyl-CoA hydratase Tax=uncultured Acidobacteria bacterium RepID=H5SQ09_9BACT
PLM2_5_b1_sep16_scaffold_33_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12146..12463)
DNA (318bp) protein (106aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A937_GEMAT
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_33_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12460..13833)
DNA (1374bp) protein (458aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A938_GEMAT
protein of unknown function DUF1446
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_33_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13830..16682)
DNA (2853bp) protein (951aa)
ial:IALB_3165 Subtilisin-like serine protease bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
subtilisin-like serine protease
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_33_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16682..18265)
DNA (1584bp) protein (528aa)
Putative acyl-CoA carboxylase beta subunit Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A939_GEMAT
carboxyl transferase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_33_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18269..18697)
DNA (429bp) protein (143aa)
Putative isobutyryl-CoA mutase small subunit Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A940_GEMAT
Methylmalonyl-CoA mutase domain-containing protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_33_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18697..19737)
DNA (1041bp) protein (347aa)
hypothetical protein bin=bin1_lowGC species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_33_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19758..21320)
DNA (1563bp) protein (521aa)
methylmalonyl-CoA mutase Tax=Desulfurispora thermophila RepID=UPI0003649C1D
methylmalonyl-CoA mutase, large subunit
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_33_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21317..22333)
DNA (1017bp) protein (339aa)
Putative transport system kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A942_GEMAT
putative transport system kinase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_33_22
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22330..23619)
DNA (1290bp) protein (430aa)
Magnesium transporter Tax=Anaeromyxobacter RepID=B4UGH7_ANASK
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
magnesium transporter
PLM2_5_b1_sep16_scaffold_33_23
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23654..24865)
DNA (1212bp) protein (404aa)
Uncharacterized protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y5P8_THEBD
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_64_85_curated
PLM2_5_b1_sep16_scaffold_33_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24862..26037)
DNA (1176bp) protein (392aa)
Transporter Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A944_GEMAT
transporter-associated region
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_33_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(26037..26330)
DNA (294bp) protein (98aa)
Endoribonuclease YbeY Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A945_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_33_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26389..28563)
DNA (2175bp) protein (725aa)
Putative domain HDIG-containing protein Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PPX0_9FIRM
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AHG90891.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_33_27
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(28565..29524)
DNA (960bp) protein (320aa)
PhoH-like protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A946_GEMAT
PhoH-like protein
PhoH-like protein {ECO:0000313|EMBL:BAH38756.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM2_5_b1_sep16_scaffold_33_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(29521..31299)
DNA (1779bp) protein (593aa)
Aspartate--tRNA ligase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A947_GEMAT
Aspartyl-tRNA synthetase
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AHG90893.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_33_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(31305..31727)
DNA (423bp) protein (141aa)
PTS system, IIA component Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4A8_SALRD
sugar phosphotransferase system protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_33_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

31848..32747
DNA (900bp) protein (300aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying items 1-30 of 236 in total

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