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PLM2_5_b1_sep16_scaffold_76

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_76_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3..287
DNA (285bp) protein (95aa)
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_76_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

316..2385
DNA (2070bp) protein (690aa)
hypothetical protein Tax=Fischerella sp. PCC 9339 RepID=UPI000300FBCE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_76_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2382..3989
DNA (1608bp) protein (536aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A762_GEMAT
metal dependent phosphohydrolase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_76_4
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

4154..5719
DNA (1566bp) protein (522aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase Tax=uncultured Acidobacteria bacterium RepID=H5SBS6_9BACT
PLM2_5_b1_sep16_scaffold_76_5
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

5724..7394
DNA (1671bp) protein (557aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Acetolactate synthase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDV2_THET1
acetolactate synthase large subunit
PLM2_5_b1_sep16_scaffold_76_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

7391..8752
DNA (1362bp) protein (454aa)
ilvC; Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Ketol-acid reductoisomerase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF94_9BACT
PLM2_5_b1_sep16_scaffold_76_7
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8749..10164
DNA (1416bp) protein (472aa)
isopropylmalate isomerase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000255|HAMAP-Rule:MF_01026}; EC=4.2.1.33 {ECO:0000255|HAMAP-Rule:MF_01026};; Alpha-IPM isomerase {ECO:0000255|HAMAP-Rule:MF_01026}; Short=IPMI {ECO:0000255|HAMAP-Rule:MF_01026};; Isopropylmalate isomerase {ECO:0000255|HAMAP-Rule:MF_01026}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
3-isopropylmalate dehydratase large subunit Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=LEUC_SYMTH
PLM2_5_b1_sep16_scaffold_76_8
Anoxybacillus flavithermus, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10161..10739
DNA (579bp) protein (193aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus flavithermus AK1.;"
isopropylmalate isomerase Tax=Alicyclobacillus pohliae RepID=UPI00035F8E74
isopropylmalate isomerase
PLM2_5_b1_sep16_scaffold_76_9
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

10736..11878
DNA (1143bp) protein (381aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase Tax=uncultured Acidobacteria bacterium RepID=H5SBS5_9BACT
PLM2_5_b1_sep16_scaffold_76_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11954..12862
DNA (909bp) protein (303aa)
ATP-dependent Clp protease ATP-binding subunit ClpC (Fragment) Tax=uncultured bacterium W5-51b RepID=H9BX56_9BACT
ATPase AAA-2 domain protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_76_11

Not on your lists

comp(12859..14472)
DNA (1614bp) protein (538aa)
Dihydroxy-acid dehydratase (DAD) (2,3-dihydroxy acid hydrolyase) {ECO:0000313|EMBL:CBH95898.1}; EC=4.2.1.9 {ECO:0000313|EMBL:CBH95898.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ilvD-1; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase (DAD) (2,3-dihydroxy acid hydrolyase) Tax=mine drainage metagenome RepID=E6PLU6_9ZZZZ
PLM2_5_b1_sep16_scaffold_76_12
S_OP1_64_32, KB1, Bacteria

Not on your lists

comp(14547..15377)
DNA (831bp) protein (277aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003697C56
prephenate dehydratase
Tax=S_OP1_64_32
PLM2_5_b1_sep16_scaffold_76_13
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15545..16537)
DNA (993bp) protein (331aa)
Fatty acid desaturase {ECO:0000313|EMBL:AKI03132.1}; EC=1.14.19.- {ECO:0000313|EMBL:AKI03132.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
Fatty acid desaturase Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SCY4_9RHIZ
fatty acid desaturase
PLM2_5_b1_sep16_scaffold_76_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16740..16958)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Q0_GEMAT
Translation initiation factor IF-1
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_76_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(17075..17746)
DNA (672bp) protein (224aa)
HAD family hydrolase Tax=Verrucomicrobium spinosum RepID=UPI000174585E
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:CDM64161.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
HAD family hydrolase
PLM2_5_b1_sep16_scaffold_76_16
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17743..20694)
DNA (2952bp) protein (984aa)
Glycosyl hydrolase BNR repeat-containing protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KQ23_HALH1
Glycosyl hydrolase BNR repeat-containing protein {ECO:0000313|EMBL:AEE53227.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
glycosyl hydrolase
PLM2_5_b1_sep16_scaffold_76_17
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

20804..22363
DNA (1560bp) protein (520aa)
Putative uncharacterized protein bin=GWA2_Ignavibacteria_55_11 species=Gillisia limnaea genus=Gillisia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM2_5_b1_sep16_scaffold_76_18
unknown

Not on your lists

22372..22773
DNA (402bp) protein (134aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_76_19
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22770..23552
DNA (783bp) protein (261aa)
Uncharacterized protein {ECO:0000313|EMBL:KHD73616.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
PLM2_5_b1_sep16_scaffold_76_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23555..23836)
DNA (282bp) protein (94aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_76_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23836..24855)
DNA (1020bp) protein (340aa)
2-oxoglutarate ferredoxin oxidoreductase beta subunit Tax=uncultured bacterium W5-51b RepID=H9BX70_9BACT
2-oxoglutarate ferredoxin oxidoreductase subunit beta
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_76_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24852..26711)
DNA (1860bp) protein (620aa)
2-oxoglutarate ferredoxin oxidoreductase alpha subunit Tax=uncultured bacterium W5-51b RepID=H9BX69_9BACT
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_76_23
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

26881..27441
DNA (561bp) protein (187aa)
Putative uncharacterized protein Tax=Streptomyces griseoflavus Tu4000 RepID=D9XW15_9ACTO
hypothetical protein
Tax=RBG_16_Chloroflexi_57_11_curated
PLM2_5_b1_sep16_scaffold_76_24
Kocuria marina, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27509..28768
DNA (1260bp) protein (420aa)
hypothetical protein Tax=Nocardiopsis halophila RepID=UPI00034B2E09
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHE75609.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria marina.;"
ABC transporter substrate-binding protein
PLM2_5_b1_sep16_scaffold_76_25
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28765..30255
DNA (1491bp) protein (497aa)
Sensor histidine kinase Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D1Y6_MYXXD
Histidine kinase {ECO:0000313|EMBL:AKF82870.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
sensor histidine kinase
PLM2_5_b1_sep16_scaffold_76_26
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30301..31668
DNA (1368bp) protein (456aa)
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HFU2_ANADF
two component sigma54 specific Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABS27588.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM2_5_b1_sep16_scaffold_76_27
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

31789..32643
DNA (855bp) protein (285aa)
Cellulose synthase subunit BcsC Tax=Gloeobacter kilaueensis JS1 RepID=U5QGU9_9CYAN
cellulose synthase subunit BcsC
Cellulose synthase subunit BcsC {ECO:0000313|EMBL:AGY58171.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
PLM2_5_b1_sep16_scaffold_76_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

32722..33279
DNA (558bp) protein (186aa)
Elongation factor P Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=EFP_GEMAT
Elongation factor P
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_76_29
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(33233..34405)
DNA (1173bp) protein (391aa)
Sarcosine oxidase Tax=Chloroflexus RepID=A9WBA1_CHLAA bin=16ft_combo_ws3_JS1 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
FAD dependent oxidoreductase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM2_5_b1_sep16_scaffold_76_30
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(34402..34962)
DNA (561bp) protein (187aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] bin=bin3_NC10 species=Desulfovibrio salexigens genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
tag; DNA-3-methyladenine glycosylase I
Tax=CSP1_5_NC10
Displaying items 1-30 of 40 in total

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