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PLM2_5_b1_sep16_scaffold_98

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_98_1
unknown

Not on your lists

comp(1..168)
DNA (168bp) protein (56aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_98_2
unknown

Not on your lists

comp(289..909)
DNA (621bp) protein (207aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_98_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1060..2082)
DNA (1023bp) protein (341aa)
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
moaA; molybdenum cofactor biosynthesis protein A
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM2_5_b1_sep16_scaffold_98_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2072..2497)
DNA (426bp) protein (142aa)
Molybdopterin converting factor, large subunit Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QE59_9FIRM
molybdopterin biosynthesis MoaE protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_98_5
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(2498..2746)
DNA (249bp) protein (83aa)
Molybdenum cofactor biosynthesis protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A905_GEMAT
molybdenum cofactor biosynthesis protein
Tax=RBG_16_Acidobacteria_68_9_curated
PLM2_5_b1_sep16_scaffold_98_6
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2754..4553)
DNA (1800bp) protein (600aa)
peptidase M61 Tax=Hymenobacter norwichensis RepID=UPI0003B3FC08
peptidase M61
Peptidase M61 {ECO:0000313|EMBL:AKD05793.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
PLM2_5_b1_sep16_scaffold_98_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4642..4956)
DNA (315bp) protein (105aa)
DNA-binding protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A906_GEMAT
histone family protein DNA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_98_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5015..6094)
DNA (1080bp) protein (360aa)
carA; carbamoyl-phosphate synthase small chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A907_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_98_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6111..6455)
DNA (345bp) protein (115aa)
Protein-export membrane protein SecG Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A908_GEMAT
secG; protein-export membrane protein SecG
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_98_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6473..7216)
DNA (744bp) protein (248aa)
Triosephosphate isomerase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A909_GEMAT
Triosephosphate isomerase, bacterial/eukaryotic
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_98_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7213..8394)
DNA (1182bp) protein (394aa)
Phosphoglycerate kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A910_GEMAT
Phosphoglycerate kinase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_98_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8391..9401)
DNA (1011bp) protein (337aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Glyceraldehyde-3-phosphate dehydrogenase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A911_GEMAT
glyceraldehyde-3-phosphate dehydrogenase, type I
PLM2_5_b1_sep16_scaffold_98_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9415..10131)
DNA (717bp) protein (239aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A912_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_98_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10124..10942)
DNA (819bp) protein (273aa)
aroE; shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A913_GEMAT
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_98_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10926..11405)
DNA (480bp) protein (160aa)
Protein-tyrosine-phosphatase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A914_GEMAT
Phosphotyrosine protein phosphatase I superfamily
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_98_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11402..12055)
DNA (654bp) protein (218aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A915_GEMAT
Sua5/YciO/YrdC/YwlC family protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_98_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12052..12762)
DNA (711bp) protein (237aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A916_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_98_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12734..14083)
DNA (1350bp) protein (450aa)
DNA repair protein radA Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A917_GEMAT
DNA repair protein RadA
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_98_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14076..15512)
DNA (1437bp) protein (479aa)
dnaB; replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A918_GEMAT
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_98_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15475..16227)
DNA (753bp) protein (251aa)
Bacteriophage-type DNA polymerase bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
putative DNA glycosylase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_98_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16224..17423)
DNA (1200bp) protein (400aa)
hypothetical protein Tax=Brevibacillus sp. phR RepID=UPI0002D6692F
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:AHG90856.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_98_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17423..17641)
DNA (219bp) protein (73aa)
Putative RNA polymerase omega subunit Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A920_GEMAT
rpoZ; putative RNA polymerase omega subunit
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_98_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17638..18297)
DNA (660bp) protein (220aa)
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A921_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_98_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18294..19172)
DNA (879bp) protein (293aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A922_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_98_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19228..21009)
DNA (1782bp) protein (594aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_98_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21006..22496)
DNA (1491bp) protein (497aa)
Probable cytosol aminopeptidase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWY8_RUBXD
cytosol aminopeptidase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_98_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22493..23683)
DNA (1191bp) protein (397aa)
Isocitrate dehydrogenase [NADP] Tax=planctomycete KSU-1 RepID=I3INY5_9PLAN
isocitrate dehydrogenase, NADP-dependent
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_98_28
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23686..24831)
DNA (1146bp) protein (382aa)
citrate synthase (EC:2.3.3.1)
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] bin=bin9_gal15 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
PLM2_5_b1_sep16_scaffold_98_29
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24880..25521)
DNA (642bp) protein (214aa)
hypothetical protein Tax=Xanthomonas sp. SHU199 RepID=UPI0003788EA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC47777.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
PLM2_5_b1_sep16_scaffold_98_30
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25563..26543)
DNA (981bp) protein (327aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A827_GEMAT
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
Displaying items 1-30 of 52 in total

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