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PLM2_5_b1_sep16_scaffold_27_28

Organism: PLM2_5_b1_sep16_Gemmatimonadetes_67_22

near complete RP 53 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 28976..29527

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG7_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 167.0
  • Bit_score: 184
  • Evalue 8.70e-44
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 170.0
  • Bit_score: 185
  • Evalue 1.10e-44
Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 171.0
  • Bit_score: 248
  • Evalue 4.00e-63

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 552
ATGAACGACAAGGTGCTTGAGGACACTCTGGCTGCTGACTCGATAGGAGCCGACGCGGCCCTCGCCGCAAGCGGGGATGCCAGTGCGTTCGAGCGGCTGTACCGCACGCACGTCAACCGCATCCACAGCCTCGTGCGCCGCATGCTCGACGCCGACGAAGCGGACGATCTCACCCAGGACGTCTTCGTCCGGGCGTGGGAGAAGCTCTCCACCTTCCGCGGCGAGTCGGCGTTCGGGACCTGGCTGCACCGCCTGGCGGTCAACGTGGTGCTGGGGCGGCGGAAGACGCTGGGCGTCGAGCGGGGACGGTTCCAAACGGGAGAAGACCCGCTCGAGGGCGTATCGGCGAAGCGTCATACGCCGGAGCTGTCGATGGACTTCGAGGAGGCGCTCGCGAACCTCCCCGATGGAGCCCGGCAAGTGTTCGTGTTGCACGATGTGGAAGGGTATCGTCACGAAGAGATCGGGCGCATGCTCGGCATAGTGCCGGGCACATCAAAATCGCAGCTGCATCATGCGCGGATGGCGCTGCGGAGGTATCTGGACCGATGA
PROTEIN sequence
Length: 184
MNDKVLEDTLAADSIGADAALAASGDASAFERLYRTHVNRIHSLVRRMLDADEADDLTQDVFVRAWEKLSTFRGESAFGTWLHRLAVNVVLGRRKTLGVERGRFQTGEDPLEGVSAKRHTPELSMDFEEALANLPDGARQVFVLHDVEGYRHEEIGRMLGIVPGTSKSQLHHARMALRRYLDR*