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PLM2_5_b1_sep16_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_27_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3..662
DNA (660bp) protein (220aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Alpha amylase catalytic region Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NRS7_ROSCS
alpha amylase catalytic region
PLM2_5_b1_sep16_scaffold_27_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

659..3199
DNA (2541bp) protein (847aa)
Putative uncharacterized protein Tax=Bacteroides ovatus 3_8_47FAA RepID=F7LFN1_BACOV
Membrane of secreted protein {ECO:0000313|EMBL:AHG91668.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
membrane of secreted protein
PLM2_5_b1_sep16_scaffold_27_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3151..3384)
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XLA3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59306.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_27_4
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(3392..5101)
DNA (1710bp) protein (570aa)
SSS sodium solute transporter superfamily Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJU6_CHLTF
SSS sodium solute transporter superfamily protein
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:AEP13113.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM2_5_b1_sep16_scaffold_27_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(5105..5386)
DNA (282bp) protein (94aa)
Uncharacterized peroxidase-related enzyme Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5L9_9CHLR
Uncharacterized peroxidase-related enzyme {ECO:0000313|EMBL:EFH80280.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_27_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5447..5692)
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WTG6_MYCKA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_27_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(5692..6006)
DNA (315bp) protein (105aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5L8_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH80279.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_27_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6029..8200)
DNA (2172bp) protein (724aa)
beta-glucosidase (EC:3.2.1.21)
Beta-glucosidase {ECO:0000313|EMBL:AEN72482.1}; EC=3.2.1.21 {ECO:0000313|EMBL:AEN72482.1};; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
Beta-glucosidase Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEK4_RHOMR
PLM2_5_b1_sep16_scaffold_27_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8289..11210
DNA (2922bp) protein (974aa)
OmpA-related protein Tax=Cystobacter fuscus DSM 2262 RepID=S9QH43_9DELT
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AHG89209.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_27_10
unknown

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comp(11132..11335)
DNA (204bp) protein (68aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_27_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11462..12616
DNA (1155bp) protein (385aa)
UPI00026CBFC3 related cluster Tax=unknown RepID=UPI00026CBFC3 bin=16ft_combo_ws3_JS1 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Protein of unknown function DUF2329
Uncharacterized protein {ECO:0000313|EMBL:AHG89210.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_27_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12613..14763)
DNA (2151bp) protein (717aa)
Peptidase S9 prolyl oligopeptidase active site domain protein Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EAW2_RUNSL
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:CDM65232.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase S9
PLM2_5_b1_sep16_scaffold_27_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14797..15267
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=Rhodanobacter fulvus Jip2 RepID=I4W0V3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93094.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_27_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15264..15650)
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82HI8_STRAW
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_27_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15727..16107
DNA (381bp) protein (127aa)
hypothetical protein bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_27_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16107..17474
DNA (1368bp) protein (456aa)
resA; thiol-disulfide oxidoreductase resA bin=bin7_NC10_sister species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
alkyl hydroperoxide reductase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_27_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17486..19390
DNA (1905bp) protein (635aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000379DB1A
Pyrrolo-quinoline quinone beta-propeller repeat-containing protein
Pyrrolo-quinoline quinone beta-propeller repeat-containing protein {ECO:0000313|EMBL:AHG88769.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_27_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

19400..20332
DNA (933bp) protein (311aa)
Inosine/uridine-preferring nucleoside hydrolase Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G7P7_CHLAD
inosine/uridine-preferring nucleoside hydrolase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_27_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

20329..21288
DNA (960bp) protein (320aa)
Putative hydroxlacyl-CoA dehydrogenase Tax=Bordetella bronchiseptica 1289 RepID=K4U0W1_BORBO
hydroxlacyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_27_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21289..21714)
DNA (426bp) protein (142aa)
Universal stress protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF7_GEMAT
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AHG91899.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_27_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21718..23109)
DNA (1392bp) protein (464aa)
Divalent metal cation transporter MntH Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF8_GEMAT
Manganese transport protein mntH
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_27_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23051..23746)
DNA (696bp) protein (232aa)
DtxR family transcriptional regulator Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF6_GEMAT
DtxR family transcriptional regulator
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_27_23

Not on your lists

comp(23828..24352)
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG0_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:KKK53640.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_27_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24418..25203)
DNA (786bp) protein (262aa)
short-chain dehydrogenase bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
short-chain dehydrogenase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_27_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

25248..26372
DNA (1125bp) protein (375aa)
Glycosyl transferase, family 2 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YR04_9CHLB
glycosyl transferase family 2
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_27_26
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26402..27091)
DNA (690bp) protein (230aa)
High-affinity nickel-transporter protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5F2_GEMAT
high-affinity nickel-transporter protein
High-affinity nickel-transporter protein {ECO:0000313|EMBL:BAH37462.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM2_5_b1_sep16_scaffold_27_27
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

27107..28927
DNA (1821bp) protein (607aa)
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM2_5_b1_sep16_scaffold_27_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

28976..29527
DNA (552bp) protein (184aa)
RNA polymerase sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG7_GEMAT
RNA polymerase sigma factor, sigma-70 family
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_27_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

29524..30171
DNA (648bp) protein (216aa)
hypothetical protein bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_27_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

30188..31093
DNA (906bp) protein (302aa)
hypothetical protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying items 1-30 of 78 in total

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