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PLM2_5_b1_sep16_scaffold_98_35

Organism: PLM2_5_b1_sep16_Gemmatimonadetes_67_22

near complete RP 53 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(29152..29712)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A927_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 184.0
  • Bit_score: 155
  • Evalue 3.40e-35
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 184.0
  • Bit_score: 155
  • Evalue 9.50e-36
Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 175.0
  • Bit_score: 203
  • Evalue 1.50e-49

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGGCCCAACCTCAGTCGATCGCCGCCGCCCCCTCTCCGGCTCCCGACGCGGATCTCATCGCGGCGTGGCGTGGGGGAGACGAGCAGGCGGCGACCGAGTTGGTGCGGCGTCACGCGCGCGCGTTGGCGCGCTTCCTCTCGGGCGCGGGGGCACCCGACGCGGATTTGGAAGACCTGGTGCAGGAAGCCTTGATTCGGGCGTTCCGGGCGGTCGACCGCTTCCGCGGGCAATGCCAGTTCCGGACGTGGCTCCTGACGATCGGCGGCAACCTGTTGAAGGATCACGGTCGGCGCGCGGCGCGACATAAGGTGGTGGCTCTGGAGGAGGGACTCGCGGCGCGGGACGGCGACCCCCACGAACGCGCTGAGGCGGGAGAGACAGAAACTCGGCTCGCCGAGGGAGTCGGCAAGCTTCCCAGATTGCAGCGCGAAGTGTTTTTGCTCCGCGCGCAGCAGGGCCTCGAGTACGAAGAGATCGCCGCGGCGTTGGACACGACGGCAGGAGCGGCACGGGTGCATTACCACCACGCGGTACGACGGCTAAAGGAGTTGATCCAGTGA
PROTEIN sequence
Length: 187
MAQPQSIAAAPSPAPDADLIAAWRGGDEQAATELVRRHARALARFLSGAGAPDADLEDLVQEALIRAFRAVDRFRGQCQFRTWLLTIGGNLLKDHGRRAARHKVVALEEGLAARDGDPHERAEAGETETRLAEGVGKLPRLQREVFLLRAQQGLEYEEIAAALDTTAGAARVHYHHAVRRLKELIQ*