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PLM2_5_b1_sep16_scaffold_106_2

Organism: PLM2_5_b1_sep16_Gemmatimonadetes_67_22

near complete RP 53 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 261..764

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC64_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 181.0
  • Bit_score: 143
  • Evalue 1.20e-31
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 164.0
  • Bit_score: 146
  • Evalue 6.80e-33
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 158.0
  • Bit_score: 177
  • Evalue 8.00e-42

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 504
ATGCCCGAGGACCTGGCTGAGATTTACCGCAGTACCTACCGCTCGCTCGTGCGTTTCCTGTACCGCAAGGTATGGGACGCCGAGCGCGCGGAGGATCTCGCCCAGGAAGCGTTCGCCCGGGCGCTGGTCCACAAACCGGAGAACGCGCGGGGGTGGCTGTTCGTCGTGGCGGCCAACATGGCACGGGACGAAGCGCGGAAAGCGGCGCGGGAAAGGCGGCACCTGACGCTCCTAAAGAGCGAGCCGGACGCCACGCACACCGAGCCGGAAGAACAGATCGATGCGGACACGCGCCGCGAACGTGTACGCGGCGCCCTCGATCAGCTGACCCCGCGCGACCGCGAAGCCTTGCTCTTGTGGGACGCCGGGATGTCGTACGATGAGATCGCCGGCCAGACCGGCCTGGCGCGGGGAGCGATCGGAACGACGCTGGCGCGAGCGCGCCGGCGGCTCGTCGAAGCCTATGACGCAGGAAGTGAGGGGCAACATGTCGCACGTGGATGA
PROTEIN sequence
Length: 168
MPEDLAEIYRSTYRSLVRFLYRKVWDAERAEDLAQEAFARALVHKPENARGWLFVVAANMARDEARKAARERRHLTLLKSEPDATHTEPEEQIDADTRRERVRGALDQLTPRDREALLLWDAGMSYDEIAGQTGLARGAIGTTLARARRRLVEAYDAGSEGQHVARG*