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PLM2_5_b1_sep16_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_106_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3..254
DNA (252bp) protein (84aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_106_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

261..764
DNA (504bp) protein (168aa)
RNA polymerase ECF-type sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC64_GEMAT
RNA polymerase sigma factor, sigma-70 family
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_106_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

748..1851
DNA (1104bp) protein (368aa)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_106_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2357..3319)
DNA (963bp) protein (321aa)
Xanthine and CO dehydrogenases maturation factor Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D4G9_PELTS
XdhC; xanthine and CO dehydrogenases maturation factor
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_106_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3316..3660)
DNA (345bp) protein (115aa)
Carboxymuconolactone decarboxylase Tax=uncultured candidate division OP1 bacterium RepID=H5SUS3_9BACT
alkylhydroperoxidase like protein, AhpD family
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_106_6
unknown

Not on your lists

comp(3675..4031)
DNA (357bp) protein (119aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_106_7
unknown

Not on your lists

comp(4149..4496)
DNA (348bp) protein (116aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_106_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4502..5707)
DNA (1206bp) protein (402aa)
hypothetical membrane protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical membrane protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_106_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5704..6243)
DNA (540bp) protein (180aa)
hypothetical protein Tax=Mariprofundus ferrooxydans RepID=UPI00036C7D3A
putative cytochrome c subfamily
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM2_5_b1_sep16_scaffold_106_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(6236..6784)
DNA (549bp) protein (183aa)
hypothetical membrane protein bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
Protein of unknown function DUF3341
Tax=CSP1_6_Rokubacteria
PLM2_5_b1_sep16_scaffold_106_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6781..8130)
DNA (1350bp) protein (450aa)
hypothetical protein; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] bin=bin1_lowGC species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin1_lowGC organism_group=Unknown_CP
Polysulfide reductase NrfD
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM2_5_b1_sep16_scaffold_106_12
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(8123..11125)
DNA (3003bp) protein (1001aa)
molybdopterin oxidoreductase Fe4S4 region; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
putative oxidoreductase
Tax=CSP1_5_NC10
PLM2_5_b1_sep16_scaffold_106_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11142..11687)
DNA (546bp) protein (182aa)
cytochrome c2 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
actA; menaquinol oxidoreductase complex ACIII, cytochrome c subunit ActA
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_106_14
unknown

Not on your lists

comp(11747..12208)
DNA (462bp) protein (154aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_106_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12255..13403)
DNA (1149bp) protein (383aa)
Mandelate racemase/muconate lactonizing protein Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CFI0_KOSOT
Mandelate racemase/muconate lactonizing protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_106_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13372..14508)
DNA (1137bp) protein (379aa)
Uncharacterized protein Tax=Paenibacillus barengoltzii G22 RepID=R9LL98_9BACL
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_106_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14474..15664)
DNA (1191bp) protein (397aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035FCAF7
FAD dependent oxidoreductase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM2_5_b1_sep16_scaffold_106_18
Paenibacillus barengoltzii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15673..16440)
DNA (768bp) protein (256aa)
Uncharacterized protein Tax=Paenibacillus barengoltzii G22 RepID=R9LDQ8_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EOS56526.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus barengoltzii G22.;"
dihydrodipicolinate synthetase
PLM2_5_b1_sep16_scaffold_106_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16542..17315)
DNA (774bp) protein (258aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A3_GEMAT
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AHG91169.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_106_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17315..18115)
DNA (801bp) protein (267aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A4_GEMAT
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:AHG91170.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_106_21
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18175..18777
DNA (603bp) protein (201aa)
Uncharacterized protein (Fragment) Tax=Acidovorax delafieldii 2AN RepID=C5TCH2_ACIDE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
PLM2_5_b1_sep16_scaffold_106_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18774..19949)
DNA (1176bp) protein (392aa)
Putative aminotransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A5_GEMAT
putative aminotransferase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_106_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19909..20658)
DNA (750bp) protein (250aa)
Putative methyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A6_GEMAT
tRNA/rRNA methyltransferase (SpoU)
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_106_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20655..23393)
DNA (2739bp) protein (913aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A7_GEMAT
Heparinase II/III family protein
Heparinase II/III family protein {ECO:0000313|EMBL:AHG91173.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM2_5_b1_sep16_scaffold_106_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23387..24400)
DNA (1014bp) protein (338aa)
Predicted kinase related to galactokinase and mevalonate kinase (EC:2.7.1.168)
Predicted kinase related to galactokinase and mevalonate kinase Tax=Chthonomonas calidirosea T49 RepID=S0EST8_9BACT
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_106_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24397..25836)
DNA (1440bp) protein (480aa)
Putative peptide ABC transporter substrate binding protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9A8_GEMAT
ABC-type transporter, periplasmic subunit
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_106_27
unknown

Not on your lists

comp(25925..26833)
DNA (909bp) protein (303aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_106_28
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

26870..27838
DNA (969bp) protein (323aa)
Binding-protein-dependent transport systems inner membrane component Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S5I0_PROA2
ABC-type transporter, integral membrane subunit
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_106_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

27849..28694
DNA (846bp) protein (282aa)
Putative peptide ABC transporter permease protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9B0_GEMAT
ABC-type transporter, integral membrane subunit
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM2_5_b1_sep16_scaffold_106_30
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(28657..29286)
DNA (630bp) protein (210aa)
Phospholipase/Carboxylesterase Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SL34_RHOMR
phospholipase/carboxylesterase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Displaying items 1-30 of 39 in total

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