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PLM2_5_b1_sep16_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 450 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_1_1
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3..245)
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=Patulibacter medicamentivorans RepID=H0E8W6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN09866.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_1_2
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(258..623)
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Patulibacter medicamentivorans RepID=H0E8W6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN09866.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_1_3
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

641..1459
DNA (819bp) protein (273aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Trehalose-6-phosphate phosphatase Tax=Patulibacter medicamentivorans RepID=H0E8W5_9ACTN
trehalose-phosphatase
PLM2_5_b1_sep16_scaffold_1_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

1468..1983
DNA (516bp) protein (172aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2V3_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB54234.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_1_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2257..3981)
DNA (1725bp) protein (575aa)
PHP domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2V8_CONWI
PHP domain-containing protein
PHP domain protein {ECO:0000313|EMBL:ADB54239.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_1_6
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4024..4779
DNA (756bp) protein (252aa)
Glycosyl transferase family 2 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UHR5_ANASK
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACL66142.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
PLM2_5_b1_sep16_scaffold_1_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

4822..5148
DNA (327bp) protein (109aa)
Thioredoxin Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2V9_CONWI
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_1_8
CG_Omnitr_07, Omnitrophica, Bacteria

Not on your lists

5163..5342
DNA (180bp) protein (60aa)
nahJ; 4-oxalocrotonate tautomerase (EC:5.3.2.-)
4-oxalocrotonate tautomerase bin=GWA2_Methylomirabilis_73_35 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=CG_Omnitr_07
PLM2_5_b1_sep16_scaffold_1_9
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5420..6142)
DNA (723bp) protein (241aa)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B60B78
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHN10011.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
PLM2_5_b1_sep16_scaffold_1_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(6390..9554)
DNA (3165bp) protein (1055aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Isoleucine--tRNA ligase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2W5_CONWI
isoleucyl-tRNA synthetase
PLM2_5_b1_sep16_scaffold_1_11
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9593..10468
DNA (876bp) protein (292aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein Tax=Aeromicrobium marinum DSM 15272 RepID=E2SE32_9ACTO
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFQ82759.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
short-chain dehydrogenase
PLM2_5_b1_sep16_scaffold_1_12
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10508..13405)
DNA (2898bp) protein (966aa)
Putative oxidoreductase Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YQA7_BRASO
oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:CAL76083.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
PLM2_5_b1_sep16_scaffold_1_13
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13414..15012)
DNA (1599bp) protein (533aa)
mdlC; Benzoylformate decarboxylase (EC:4.1.1.7)
Predicted protein Tax=Streptomyces sp. C RepID=D9VSN5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJY40359.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;"
PLM2_5_b1_sep16_scaffold_1_14
unknown

Not on your lists

15261..15812
DNA (552bp) protein (184aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_1_15
unknown

Not on your lists

15887..16360
DNA (474bp) protein (158aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_1_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

16399..17712
DNA (1314bp) protein (438aa)
Fumarate hydratase class II Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2X3_CONWI
fumarate lyase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_1_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(17925..19802)
DNA (1878bp) protein (626aa)
metallophosphoesterase Tax=Curtobacterium ginsengisoli RepID=UPI0003B6E8C8
calcineurin-like phosphoesterase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM2_5_b1_sep16_scaffold_1_18
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(19831..21276)
DNA (1446bp) protein (482aa)
Aldehyde Dehydrogenase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A1K7_THECD
aldehyde dehydrogenase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_1_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

21356..22528
DNA (1173bp) protein (391aa)
SpoIID/LytB domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF26_CONWI
SpoIID/LytB domain-containing protein
SpoIID/LytB domain protein {ECO:0000313|EMBL:ADB51743.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_1_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(22661..23683)
DNA (1023bp) protein (341aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5M0_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB52569.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_1_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(23686..24759)
DNA (1074bp) protein (358aa)
Ribosome-binding ATPase YchF Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Y1_CONWI
GTP-binding protein YchF
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_1_22
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(24756..25217)
DNA (462bp) protein (154aa)
Integral membrane protein Tax=Patulibacter medicamentivorans RepID=H0E4S6_9ACTN
Integral membrane protein {ECO:0000313|EMBL:EHN11312.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
phosphoesterase PA-phosphatase-like protein
PLM2_5_b1_sep16_scaffold_1_23
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25428..26393
DNA (966bp) protein (322aa)
hypothetical protein bin=bin5_DeltaP species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Tax=CSP1_8_Deltaproteobacteria
PLM2_5_b1_sep16_scaffold_1_24
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

26559..29585
DNA (3027bp) protein (1009aa)
Uncharacterized protein Tax=Patulibacter medicamentivorans RepID=H0E689_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10787.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_1_25
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

29667..30437
DNA (771bp) protein (257aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
DNA-(Apurinic or apyrimidinic site) lyase {ECO:0000313|EMBL:ADB54205.1}; EC=4.2.99.18 {ECO:0000313|EMBL:ADB54205.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
DNA-(Apurinic or apyrimidinic site) lyase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2S4_CONWI
PLM2_5_b1_sep16_scaffold_1_26
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30503..30727
DNA (225bp) protein (75aa)
Uncharacterized protein Tax=Actinoplanes sp. N902-109 RepID=R4LCV3_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL13594.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM2_5_b1_sep16_scaffold_1_27
unknown

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31419..32099
DNA (681bp) protein (227aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_1_28
Emiliania huxleyi, Emiliania, Isochrysidales, Eukaryota

Not on your lists

32188..34191
DNA (2004bp) protein (668aa)
Uncharacterized protein (Fragment) Tax=Emiliania huxleyi CCMP1516 RepID=R1BL70_EMIHU
Uncharacterized protein {ECO:0000313|EMBL:EOD10593.1, ECO:0000313|EnsemblProtists:EOD10593}; Flags: Fragment;; species="Eukaryota; Haptophyceae; Isochrysidales; Noelaerhabdaceae; Emiliania.;" source="Emiliania huxleyi CCMP1516.;"
Conserved protein of unknown function, protein PE_PGRS54 (fragment)
PLM2_5_b1_sep16_scaffold_1_29
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34262..34888)
DNA (627bp) protein (209aa)
Methyltransferase type 11 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYF7_RUBXD
ubiE/COQ5 methyltransferase family
UbiE/COQ5 methyltransferase family {ECO:0000313|EMBL:AHY48157.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM2_5_b1_sep16_scaffold_1_30
unknown

Not on your lists

comp(34888..35115)
DNA (228bp) protein (76aa)
hypothetical protein
Displaying items 1-30 of 450 in total

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