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PLM2_5_b1_sep16_scaffold_26

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_26_1
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..511)
DNA (510bp) protein (170aa)
XRE family transcriptional regulator Tax=Nocardiopsis salina RepID=UPI000349D1AD
PhoP-like protein
PhoP-like protein {ECO:0000313|EMBL:ACS29923.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC; 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230) (Micrococcus; lysodeikticus).;"
PLM2_5_b1_sep16_scaffold_26_2
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(531..1832)
DNA (1302bp) protein (434aa)
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
Multi-sensor signal transduction histidine kinase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ART6_RUBXD
Phosphate regulon sensor protein PhoR {ECO:0000313|EMBL:AKF04896.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
PLM2_5_b1_sep16_scaffold_26_3
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1902..2648
DNA (747bp) protein (249aa)
Glycosyl transferase family 2 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0I7M8_9BACL
glycosyl transferase family protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
PLM2_5_b1_sep16_scaffold_26_4
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

2645..3085
DNA (441bp) protein (147aa)
hypothetical protein Tax=Paenibacillus fonticola RepID=UPI0003676F8D
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_67_18
PLM2_5_b1_sep16_scaffold_26_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3091..4188)
DNA (1098bp) protein (366aa)
DNA polymerase III, delta prime subunit Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZI3_CONWI
DNA polymerase III delta prime subunit
DNA polymerase III, delta prime subunit {ECO:0000313|EMBL:ADB53821.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_26_6
Olsenella profusa, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4294..4911)
DNA (618bp) protein (206aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella profusa F0195.;"
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase Tax=Olsenella profusa F0195 RepID=U2TAH5_9ACTN
PLM2_5_b1_sep16_scaffold_26_7
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4987..7281)
DNA (2295bp) protein (765aa)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
DNA topoisomerase 1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUL7_RUBXD
PLM2_5_b1_sep16_scaffold_26_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7297..8229
DNA (933bp) protein (311aa)
NAD-dependent epimerase/dehydratase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFC8_CONWI
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADB53721.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_26_9
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

8304..9050
DNA (747bp) protein (249aa)
siroheme synthase (EC:1.3.1.76)
siroheme synthase Tax=Patulibacter americanus RepID=UPI0003B78EA9
Siroheme synthase {ECO:0000313|EMBL:EHN09205.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
PLM2_5_b1_sep16_scaffold_26_10
Pseudanabaena biceps, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9214..9702)
DNA (489bp) protein (163aa)
Regulatory protein MarR Tax=Pseudanabaena biceps PCC 7429 RepID=L8MZP9_9CYAN
Regulatory protein MarR {ECO:0000313|EMBL:ELS32239.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena biceps PCC 7429.;"
MarR family transcriptional regulator
PLM2_5_b1_sep16_scaffold_26_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9870..10421
DNA (552bp) protein (184aa)
YceI family protein Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8HDX6_ARTCA
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_26_12
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10424..10996
DNA (573bp) protein (191aa)
NADPH-dependent FMN reductase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFG9_CONWI
Putative NADPH-dependent oxidoreductase {ECO:0000313|EMBL:GAF47090.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
NADPH-dependent FMN reductase
PLM2_5_b1_sep16_scaffold_26_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(11113..11847)
DNA (735bp) protein (245aa)
Channel protein, hemolysin III family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFE9_CONWI
hemolysin III family channel protein
Channel protein, hemolysin III family {ECO:0000313|EMBL:ADB53742.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_26_14
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

12019..15291
DNA (3273bp) protein (1091aa)
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:ACU53963.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ACU53963.1};; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC; 103882 / ICP).;"
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7LZ05_ACIFD
PLM2_5_b1_sep16_scaffold_26_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15329..16003
DNA (675bp) protein (225aa)
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:ADB53831.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ADB53831.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZJ3_CONWI
PLM2_5_b1_sep16_scaffold_26_16
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16621..17961)
DNA (1341bp) protein (447aa)
Cytochrome P450 Tax=Patulibacter medicamentivorans RepID=H0E0U8_9ACTN
Cytochrome P450 {ECO:0000313|EMBL:EHN12712.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
cytochrome P450 family protein
PLM2_5_b1_sep16_scaffold_26_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

18028..18609
DNA (582bp) protein (194aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCV4_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB51466.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_26_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

18606..18899
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7D1_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB48902.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_26_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(18905..21454)
DNA (2550bp) protein (850aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1G9_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB52132.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_26_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(21462..22220)
DNA (759bp) protein (253aa)
ABC transporter related protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1H0_CONWI
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB52133.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_26_21
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

22363..23148
DNA (786bp) protein (262aa)
id=14425984 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
HAD-superfamily hydrolase
Tax=CSP1_2_Dadabacteria
PLM2_5_b1_sep16_scaffold_26_22
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23145..24326
DNA (1182bp) protein (394aa)
membrane protein Tax=Micromonospora sp. CNB394 RepID=UPI000369680A
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADL46240.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM2_5_b1_sep16_scaffold_26_23
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24370..25155)
DNA (786bp) protein (262aa)
Uncharacterized protein Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YNS2_NOCFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD60169.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
PLM2_5_b1_sep16_scaffold_26_24
unknown

Not on your lists

comp(25183..25722)
DNA (540bp) protein (180aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_26_25
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25760..26164
DNA (405bp) protein (135aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
Peptide methionine sulfoxide reductase MsrB Tax=Microcoleus sp. PCC 7113 RepID=K9WCC9_9CYAN
methionine-R-sulfoxide reductase
PLM2_5_b1_sep16_scaffold_26_26
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(26204..26857)
DNA (654bp) protein (218aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI000374D7E0
putative NarL family two-component response regulator
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
PLM2_5_b1_sep16_scaffold_26_27
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26854..28125)
DNA (1272bp) protein (424aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDK2_CONWI
Tax=RBG_16_Actinobacteria_64_13_curated
PLM2_5_b1_sep16_scaffold_26_28
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(28138..28506)
DNA (369bp) protein (123aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDK3_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49577.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_26_29
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

28561..29037
DNA (477bp) protein (159aa)
NADH-FMN oxidoreductase Tax=Patulibacter medicamentivorans RepID=H0E137_9ACTN
NADH-FMN oxidoreductase {ECO:0000313|EMBL:EHN12612.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
flavin reductase domain-containing protein
PLM2_5_b1_sep16_scaffold_26_30
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29111..29572
DNA (462bp) protein (154aa)
hypothetical protein Tax=Streptomyces canus RepID=UPI00037753CC
Putative uncharacterized protein {ECO:0000313|EMBL:EDY60653.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
hypothetical protein
Displaying items 1-30 of 104 in total

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