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PLM2_5_b1_sep16_scaffold_28

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_28_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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2..913
DNA (912bp) protein (304aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
DNA primase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FD13_CONWI
DNA primase
PLM2_5_b1_sep16_scaffold_28_trna_1
unknown

Not on your lists

936..1008
DNA (73bp)
transferRNA Asn
PLM2_5_b1_sep16_scaffold_28_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1012..2226)
DNA (1215bp) protein (405aa)
Glycosyl transferase-like UDP-glucuronosyltransferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FD21_CONWI
glycosyl transferase-like UDP-glucuronosyltransferase
Glycosyl transferase-like UDP-glucuronosyltransferase {ECO:0000313|EMBL:ADB51533.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_28_3
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2204..2971)
DNA (768bp) protein (256aa)
short-chain dehydrogenase Tax=Patulibacter americanus RepID=UPI0003B41FDE
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EHN09170.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
short-chain dehydrogenase/reductase SDR
PLM2_5_b1_sep16_scaffold_28_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3005..4087
DNA (1083bp) protein (361aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5R8_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB52617.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_28_5
unknown

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4084..4449
DNA (366bp) protein (122aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_28_trna_2
unknown

Not on your lists

4504..4577
DNA (74bp)
transferRNA Met
PLM2_5_b1_sep16_scaffold_28_6
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

5141..5590
DNA (450bp) protein (150aa)
Tax=RBG_16_KB1_OP1_55_9_curated
PLM2_5_b1_sep16_scaffold_28_7
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

5703..5963
DNA (261bp) protein (87aa)
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM2_5_b1_sep16_scaffold_28_8
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6615..6971
DNA (357bp) protein (119aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000362FA5D
Uncharacterized protein {ECO:0000313|EMBL:KJK45955.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_28_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6991..7686)
DNA (696bp) protein (232aa)
Phenazine biosynthesis PhzC/PhzF protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUD0_RUBXD
phenazine biosynthesis PhzC/PhzF protein
Phenazine biosynthesis PhzC/PhzF protein {ECO:0000313|EMBL:ABG04998.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM2_5_b1_sep16_scaffold_28_10
Plasmodium fragile, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

Not on your lists

7748..8128
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Plasmodium yoelii 17X RepID=V7PNZ7_9APIC
Uncharacterized protein {ECO:0000313|EMBL:KJP87972.1}; species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium).;" source="Plasmodium fragile.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_28_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(8125..9306)
DNA (1182bp) protein (394aa)
Diguanylate cyclase and metal dependent phosphohydrolase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBT8_CONWI
diguanylate cyclase and metal dependent phosphohydrolase
Diguanylate cyclase and metal dependent phosphohydrolase {ECO:0000313|EMBL:ADB51353.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_28_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

9422..9751
DNA (330bp) protein (110aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA17_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB53112.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_28_13
unknown

Not on your lists

comp(9748..10524)
DNA (777bp) protein (259aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_28_14
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

10613..12148
DNA (1536bp) protein (512aa)
serine/threonine protein kinase bin=bin8_Chloro species=Streptomyces davawensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
serine/threonine protein kinase
Tax=CSP1_4_Chloroflexi
PLM2_5_b1_sep16_scaffold_28_15
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12179..12640)
DNA (462bp) protein (154aa)
Putative uncharacterized protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HE05_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS26951.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM2_5_b1_sep16_scaffold_28_16
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12637..13506)
DNA (870bp) protein (290aa)
Putative integral membrane protein Tax=Patulibacter medicamentivorans RepID=H0E8K8_9ACTN
Putative integral membrane protein {ECO:0000313|EMBL:EHN10008.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_28_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(13503..14240)
DNA (738bp) protein (246aa)
transmembrane_regions 71..93 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM2_5_b1_sep16_scaffold_28_18
unknown

Not on your lists

comp(14296..14625)
DNA (330bp) protein (110aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_28_19
unknown

Not on your lists

comp(14622..15005)
DNA (384bp) protein (128aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_28_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15067..15921
DNA (855bp) protein (285aa)
Transcriptional regulator, RpiR family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDW1_CONWI
RpiR family transcriptional regulator
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:ADB51577.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_28_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16223..17110
DNA (888bp) protein (296aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Pyridoxal biosynthesis lyase PdxS Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDW3_CONWI
pyridoxine biosynthesis protein
PLM2_5_b1_sep16_scaffold_28_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

17103..17702
DNA (600bp) protein (200aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Glutamine amidotransferase subunit PdxT Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDW4_CONWI
SNO glutamine amidotransferase
PLM2_5_b1_sep16_scaffold_28_23
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

17699..18802
DNA (1104bp) protein (368aa)
Peptidase M29 aminopeptidase II Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B5V9_HERA2
peptidase M29 aminopeptidase II
Tax=RBG_13_Chloroflexi_53_26_curated
PLM2_5_b1_sep16_scaffold_28_24
unknown

Not on your lists

comp(18806..19252)
DNA (447bp) protein (149aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_28_25
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

19279..20028
DNA (750bp) protein (250aa)
Probable transcriptional regulatory protein Cwoe_3178 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY1_CONWI
hypothetical protein
Probable transcriptional regulatory protein Cwoe_3178 {ECO:0000256|HAMAP-Rule:MF_00693}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_28_26
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

20106..20627
DNA (522bp) protein (174aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Crossover junction endodeoxyribonuclease RuvC Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY2_CONWI
PLM2_5_b1_sep16_scaffold_28_27
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

20624..21220
DNA (597bp) protein (199aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Holliday junction ATP-dependent DNA helicase RuvA Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY3_CONWI
Holliday junction DNA helicase RuvA
PLM2_5_b1_sep16_scaffold_28_28
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

21217..22278
DNA (1062bp) protein (354aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Holliday junction ATP-dependent DNA helicase RuvB Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY4_CONWI
Holliday junction DNA helicase RuvB
Displaying items 1-30 of 89 in total

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