ggKbase home page

PLM2_5_b1_sep16_scaffold_370_5

Organism: PLM2_5_b1_sep16_Actinobacteria_Rubrobacteridae_69_19

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(3509..5452)

Top 3 Functional Annotations

Value Algorithm Source
O-antigen polymerase Tax=Patulibacter medicamentivorans RepID=H0E2C3_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 37.4
  • Coverage: 618.0
  • Bit_score: 381
  • Evalue 1.00e-102
O-antigen polymerase {ECO:0000313|EMBL:EHN12194.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.4
  • Coverage: 618.0
  • Bit_score: 381
  • Evalue 1.40e-102
O-antigen polymerase similarity KEGG
DB: KEGG
  • Identity: 30.1
  • Coverage: 632.0
  • Bit_score: 229
  • Evalue 2.40e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1944
ATGCGCCGGCGCTCGGCGCCGCTGGAATACGTGCGCAGAGTCGATTGGAATGCTGCCGGAACCTGGCTGCTGAGCTTCGGCCTGGTCGCTTACCTGGGCCTCAAGGGGGGCGGCTATGACCCGCTCATCCACGATCAGGTGGGGATCGCCGTTTGGTGGGTCCTGCTTGCCGCGGTGCTGGTCGGGGCGCTGCCGCGCCGCGACCCCGGTCGCCTCGCCTGGGTCGCGCTGGGCTTGTTTGCGGCGTTCGTGGCCTGGACGGCCCTCAGCCTCGGCTGGACCGAGAGCGTCGACAGGACCTCGGCCGACCTGGCCCGCGTCTGCGGCTACCTCGGGGTCTTCGCCCTCGCGATCCTCAGCCGCAACTCACGCGAATCGCAGCGAGTGATCGGCGCGGTGGCGGCCGCGATCGTCCTCGTTTCCCTGGTCGGTCTGCTCGCTCGCCTCCACCCCTCTTGGTTCCCGGACGCGGCCAAGACGGCGCGGTTCCTCACCGACAGCGAAAGGCTCTCCTACCCCCTCAACTACTGGAACGGGCTCGCCGGCCTGATCGCGATCGGCCTGCCGCTCCTGCTCCAGGTCGCGACCTGCGCCAAGTCGATGCTGACCCGGGCTCTGGCCGCCGCGGCCCTGCCGGCGATGGCGCTGACCATCTTCCTGACCCTCTCCCGCGGCGGGATAGCGGCGGCGATCATCGCGGTCGCTCTCTTCGTCGTGCTCACCTCCGATCGCCTCCCGCAGCTGCTCACCCTGGTGGTCGCGGGGGCGGGAAGCGCCGTCCTGATCGCCGCCGCGGCGGGTCGCGACGCGGTTCAGGACGGCCTCTTGAACGCGGTCGCGCGAGACCAGGGCAACGAACTGCTCTGGATCTCGCTCGCCGTCTGCCTGGCGGTGGGGCTGGTCCAGGCGGCCCTGTCGAGCGCCGCCGTCGCAGGCAGGCGCCCCGGCTGGACGCGAATCTCGCGCTCCAACTCGCTCGCGGCGACGGCGGTGGCGCTGGTGGTCCTGGCGGTCATCGCGGTCGCCCTCGGGGCTCCCGGCCGCGTCTCCAACGGTTGGGACGAATTCAAGGCGGGCGGGGGGGCTGGATCCGGTGCCGGGCGGCTCGGCAGCGTCGCCGGGCAGAGCCGCTACCAGCTGTGGAGCGCCGCGGTGAGGGAGAACGGGACGAAGCCCTTTACCGGCACCGGCTCCGGCACCTTCGAATACTGGTGGACGCGCGACGGGGACACGACGGAAACGGTGCGCGATACCCACTCCCTGTACCTGCAGACTCTGGGCGAGCTGGGGATCGCAGGGTTCGGCTTGATCGTCGCCTTCCTGCTGGCGATCGTGGTCGGCGGTGGAAGGAGGCTCCTCGCGGCCGCTCCCCGGGCCCGCCCCCAGATCGCCGCCGCGCTCGCGGGAGTCGCGGCGTTCTGCATCACCGCGGTGTTCGACTGGATGTGGCAGATACCGGTCCTCCCGGTCGCGATGCTCCTGCTCGGCTCGGTCCTCGTGATGCCGCCCTCTGCGGTGCCCGGTGCCAAGGGTGTACGCGCCGGCCTGCGGCTCCCGTTCCGCCTGGCGCTCGCCGCGCTCGCCCTTGCGGCGATCGTGGCGATCGCGATTCCCCTCGCCACCGGGAGCCTGGTTCGGCAGAGCGAAGCGGATGCCCGCGCCGGCGACCTCTCGGCTGCGCTGGAGGAGGCCCGGACCGCTCAGAACGTCCAGCCCGGGACGGCAGGGCCACGCCTGCAGGAGGCGCTCGTGCTCGAGGCCCGGGGCGACCTCGCCCCCGCCGCGGAGGCGGCGCGCGCGGCGACGAAGCGGGAGTCGACCAACTGGCGCACCTGGCTGGTGCTCTCGCGAATCGAAGCCGAGCGCGGCAGGGCGGCTACGGCCGTCAGCGCCTACCGCCGGGCGCGATCTCTGAACCCGCGCTCGGAGCTGTTTGCGCGGTGA
PROTEIN sequence
Length: 648
MRRRSAPLEYVRRVDWNAAGTWLLSFGLVAYLGLKGGGYDPLIHDQVGIAVWWVLLAAVLVGALPRRDPGRLAWVALGLFAAFVAWTALSLGWTESVDRTSADLARVCGYLGVFALAILSRNSRESQRVIGAVAAAIVLVSLVGLLARLHPSWFPDAAKTARFLTDSERLSYPLNYWNGLAGLIAIGLPLLLQVATCAKSMLTRALAAAALPAMALTIFLTLSRGGIAAAIIAVALFVVLTSDRLPQLLTLVVAGAGSAVLIAAAAGRDAVQDGLLNAVARDQGNELLWISLAVCLAVGLVQAALSSAAVAGRRPGWTRISRSNSLAATAVALVVLAVIAVALGAPGRVSNGWDEFKAGGGAGSGAGRLGSVAGQSRYQLWSAAVRENGTKPFTGTGSGTFEYWWTRDGDTTETVRDTHSLYLQTLGELGIAGFGLIVAFLLAIVVGGGRRLLAAAPRARPQIAAALAGVAAFCITAVFDWMWQIPVLPVAMLLLGSVLVMPPSAVPGAKGVRAGLRLPFRLALAALALAAIVAIAIPLATGSLVRQSEADARAGDLSAALEEARTAQNVQPGTAGPRLQEALVLEARGDLAPAAEAARAATKRESTNWRTWLVLSRIEAERGRAATAVSAYRRARSLNPRSELFAR*