ggKbase home page

PLM2_5_b1_sep16_scaffold_370

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_370_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

2..538
DNA (537bp) protein (179aa)
HpcH/HpaI aldolase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5S8_CONWI
HpcH/HpaI aldolase
HpcH/HpaI aldolase {ECO:0000313|EMBL:ADB52627.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_370_2
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

535..1326
DNA (792bp) protein (264aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003637798
hypothetical protein
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM2_5_b1_sep16_scaffold_370_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1323..3131)
DNA (1809bp) protein (603aa)
phosphoenolpyruvate carboxykinase (GTP) (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Phosphoenolpyruvate carboxykinase [GTP] Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5S6_CONWI
PLM2_5_b1_sep16_scaffold_370_4
unknown

Not on your lists

comp(3142..3444)
DNA (303bp) protein (101aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_370_5
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3509..5452)
DNA (1944bp) protein (648aa)
O-antigen polymerase Tax=Patulibacter medicamentivorans RepID=H0E2C3_9ACTN
O-antigen polymerase {ECO:0000313|EMBL:EHN12194.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
O-antigen polymerase
PLM2_5_b1_sep16_scaffold_370_6
unknown

Not on your lists

5575..6132
DNA (558bp) protein (186aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_370_7
unknown

Not on your lists

6148..7623
DNA (1476bp) protein (492aa)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B4F0A8
PLM2_5_b1_sep16_scaffold_370_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

7652..8899
DNA (1248bp) protein (416aa)
Uncharacterized protein Tax=Sulfobacillus acidophilus RepID=F8ICD0_SULAT
wbpA; hypothetical protein
Tax=RBG_16_Nitrospirae_64_22_curated
PLM2_5_b1_sep16_scaffold_370_9
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8859..11072)
DNA (2214bp) protein (738aa)
Para-aminobenzoate synthase, subunit I Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LUN0_HALO1
para-aminobenzoate synthase subunit I
Para-aminobenzoate synthase, subunit I {ECO:0000313|EMBL:ACY13920.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM2_5_b1_sep16_scaffold_370_10
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11117..11848
DNA (732bp) protein (244aa)
Glutamine amidotransferase, class I Tax=Aeromicrobium marinum DSM 15272 RepID=E2SC95_9ACTO
Glutamine amidotransferase, class I {ECO:0000313|EMBL:EFQ83381.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
chorismate binding-like protein
PLM2_5_b1_sep16_scaffold_370_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11864..13081
DNA (1218bp) protein (406aa)
succinate--CoA ligase (ADP-forming) (EC:6.2.1.5)
Succinate--CoA ligase (ADP-forming) {ECO:0000313|EMBL:ADB52628.1}; EC=6.2.1.5 {ECO:0000313|EMBL:ADB52628.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Succinate--CoA ligase (ADP-forming) Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5S9_CONWI
PLM2_5_b1_sep16_scaffold_370_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13078..13557
DNA (480bp) protein (160aa)
Cupin Tax=Halosarcina pallida JCM 14848 RepID=M0D898_9EURY
cupin
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_370_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

13554..14471
DNA (918bp) protein (306aa)
CoA-binding domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5T0_CONWI
CoA-binding protein
CoA-binding domain protein {ECO:0000313|EMBL:ADB52629.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_370_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

14471..14704
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5T1_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB52630.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_370_15
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14850..16151
DNA (1302bp) protein (434aa)
3-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:CEL15892.1}; EC=2.3.1.16 {ECO:0000313|EMBL:CEL15892.1};; EC=2.3.1.9 {ECO:0000313|EMBL:CEL15892.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
acetyl-CoA acetyltransferase (EC:2.3.1.16)
acetyl-CoA acetyltransferase Tax=Saccharomonospora saliphila RepID=UPI000377695B
PLM2_5_b1_sep16_scaffold_370_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16148..17473
DNA (1326bp) protein (442aa)
Short-chain dehydrogenase/reductase SDR Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F554_CONWI
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB48632.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_370_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

17475..18383
DNA (909bp) protein (303aa)
MaoC domain protein dehydratase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F555_CONWI
MaoC domain-containing protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:ADB48633.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_370_18
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

18380..19711
DNA (1332bp) protein (444aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:EHN09800.1}; EC=1.3.8.1 {ECO:0000313|EMBL:EHN09800.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
fadE24; acyl-CoA dehydrogenase (EC:1.3.99.-)
Butyryl-CoA dehydrogenase Tax=Patulibacter medicamentivorans RepID=H0E962_9ACTN
PLM2_5_b1_sep16_scaffold_370_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

19727..20941
DNA (1215bp) protein (405aa)
Acyl-CoA dehydrogenase domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F557_CONWI
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ADB48635.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_370_20
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20996..21676)
DNA (681bp) protein (227aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00035E804F
transcriptional regulator
HxlR family transcriptional regulator {ECO:0000313|EMBL:EQD87187.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
PLM2_5_b1_sep16_scaffold_370_21
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

21746..23875
DNA (2130bp) protein (710aa)
Integral membrane protein Tax=Patulibacter medicamentivorans RepID=H0E4T0_9ACTN
Integral membrane protein {ECO:0000313|EMBL:EHN11316.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
putative drug exporters of the RND superfamily
PLM2_5_b1_sep16_scaffold_370_22
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

23950..25398
DNA (1449bp) protein (483aa)
Acetyl-coenzyme A synthetase {ECO:0000313|EMBL:EHN11249.1}; EC=6.2.1.1 {ECO:0000313|EMBL:EHN11249.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Acetyl-coenzyme A synthetase Tax=Patulibacter medicamentivorans RepID=H0E4Z8_9ACTN
AMP-dependent synthetase and ligase
PLM2_5_b1_sep16_scaffold_370_23
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(25407..25814)
DNA (408bp) protein (136aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAJ3_CONWI
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ADB49262.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 23 items

View Taxonomy