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PLM2_5_b1_sep16_scaffold_6_24

Organism: PLM2_5_b1_sep16_Actinobacteria_Rubrobacteridae_69_19

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: 25482..25802

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix HxlR type Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DQQ4_DESRL similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 87.0
  • Bit_score: 79
  • Evalue 1.30e-12
helix-turn-helix HxlR type similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 87.0
  • Bit_score: 79
  • Evalue 3.80e-13
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 103.0
  • Bit_score: 100
  • Evalue 7.90e-19

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGTCGCCGCGATGTCGTAGTTGCGCGCCGGTCCCGCCCGAGCTGCGGGCGGCGGCCTGCCTGCTCGAGCGCCGCTGGACGCTGGCGACGATCTACGCCTGCTCCAGCGGCGCGGCCCGCTTCAACGAGCTCCGCCAGTCGTTGCCCGGGGTCTCGCCGACGACGCTCTCGGAGCGCCTCGAGCAGCTCGAGGCGGAGCGGATCGTCGATCGGCGCCTGGTGCCGGGCCGTCCCCCTCACACCGAGTACGTCCTGACGCGCCACGGCGAGCGCCTGGCCCGGGCCGTTGCCGGCCTGCTCGAGAAACAGGCGGGGGAGTAG
PROTEIN sequence
Length: 107
MSPRCRSCAPVPPELRAAACLLERRWTLATIYACSSGAARFNELRQSLPGVSPTTLSERLEQLEAERIVDRRLVPGRPPHTEYVLTRHGERLARAVAGLLEKQAGE*