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PLM2_5_b1_sep16_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 202 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_6_1
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..518
DNA (516bp) protein (172aa)
Glutathione S-transferase domain-containing protein Tax=Marinobacter nanhaiticus D15-8W RepID=N6VZ19_9ALTE
Glutathione S-transferase domain-containing protein {ECO:0000313|EMBL:ENO13119.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanhaiticus D15-8W.;"
glutathione S-transferase domain-containing protein
PLM2_5_b1_sep16_scaffold_6_2

Not on your lists

comp(610..1314)
DNA (705bp) protein (235aa)
hypothetical protein Tax=Dehalobacter sp. FTH1 RepID=UPI00037D390A
Uncharacterized protein {ECO:0000313|EMBL:KKK88846.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_6_3
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1434..1856
DNA (423bp) protein (141aa)
CBS domains protein Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WVE8_9ACTO
CBS domains protein {ECO:0000313|EMBL:EFL22325.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
signal transduction protein with CBS domains
PLM2_5_b1_sep16_scaffold_6_4
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2124..2999)
DNA (876bp) protein (292aa)
Uncharacterized protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K5H8_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH32857.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM2_5_b1_sep16_scaffold_6_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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3500..4177
DNA (678bp) protein (226aa)
DNA ligase D, 3'-phosphoesterase domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F192_CONWI
DNA ligase D
DNA ligase D, 3'-phosphoesterase domain protein {ECO:0000313|EMBL:ADB52055.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_6_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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4520..5143
DNA (624bp) protein (208aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAE7_CONWI
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADB49216.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_6_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(5211..7133)
DNA (1923bp) protein (641aa)
tRNA synthetase class I (M) Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZZ0_CONWI
tRNA synthetase class I (M)
tRNA synthetase class I (M) {ECO:0000313|EMBL:ADB49966.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_6_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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7232..8929
DNA (1698bp) protein (566aa)
Arginyl-tRNA synthetase-like protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCG4_CONWI
Arginyl-tRNA synthetase-like protein
Arginyl-tRNA synthetase-like protein {ECO:0000313|EMBL:ADB49437.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_6_9
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9308..10873
DNA (1566bp) protein (522aa)
L-beta-lysine 5,6-aminomutase alpha subunit Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CSN5_9CLOT
Dioxygenase {ECO:0000313|EMBL:KGG80144.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
D-lysine 5,6-aminomutase subunit alpha
PLM2_5_b1_sep16_scaffold_6_10
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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10866..11660
DNA (795bp) protein (265aa)
L-beta-lysine 5,6-aminomutase beta subunit {ECO:0000313|EMBL:EOD01670.1}; EC=5.4.3.3 {ECO:0000313|EMBL:EOD01670.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
L-beta-lysine 5,6-aminomutase beta subunit Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CHA0_9CLOT
cobalamin B12-binding domain-containing protein
PLM2_5_b1_sep16_scaffold_6_11
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11669..12811
DNA (1143bp) protein (381aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003497D1D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH99498.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM2_5_b1_sep16_scaffold_6_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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12868..13674
DNA (807bp) protein (269aa)
Transcriptional regulator, XRE family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5Z2_CONWI
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADB48665.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_6_13
Mycobacterium farcinogenes, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13744..14208
DNA (465bp) protein (155aa)
Uncharacterized protein {ECO:0000313|EMBL:CDP82212.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium farcinogenes.;"
PLM2_5_b1_sep16_scaffold_6_14
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14247..14732)
DNA (486bp) protein (162aa)
Uncharacterized protein Tax=alpha proteobacterium JLT2015 RepID=M2U2Q8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EMD82252.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
Protein-S-isoprenylcysteineO-methyltransferase
PLM2_5_b1_sep16_scaffold_6_15
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14810..16099)
DNA (1290bp) protein (430aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00036807DB
putative serine/threonine protein kinase
Putative serine/threonine protein kinase {ECO:0000313|EMBL:BAL88642.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM2_5_b1_sep16_scaffold_6_16
unknown

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comp(16115..16561)
DNA (447bp) protein (149aa)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B46C6E
PLM2_5_b1_sep16_scaffold_6_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16684..17958)
DNA (1275bp) protein (425aa)
hypothetical protein Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE998
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25311.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM2_5_b1_sep16_scaffold_6_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18124..18369
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT11_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25310.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM2_5_b1_sep16_scaffold_6_19
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

18404..19606
DNA (1203bp) protein (401aa)
Formate dehydrogenase (EC:1.2.1.2); K00122 formate dehydrogenase [EC:1.2.1.2] bin=bin8_Chloro species=Sinorhizobium meliloti genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
Formate dehydrogenase (EC:1.2.1.2)
Tax=CSP1_4_Chloroflexi
PLM2_5_b1_sep16_scaffold_6_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

19635..20735
DNA (1101bp) protein (367aa)
Alcohol dehydrogenase GroES domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEY1_CONWI
alcohol dehydrogenase GroES domain protein
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ADB51698.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_6_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(20732..21013)
DNA (282bp) protein (94aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3K2_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB52367.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_6_22
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21267..23153
DNA (1887bp) protein (629aa)
Na(+)/H(+) antiporter NhaA Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BFK3_STRRD
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
sodium/proton antiporter
PLM2_5_b1_sep16_scaffold_6_23
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

23210..25501
DNA (2292bp) protein (764aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
ATP-dependent protease La (EC:3.4.21.53)
Lon protease Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBT2_CONWI
PLM2_5_b1_sep16_scaffold_6_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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25482..25802
DNA (321bp) protein (107aa)
Helix-turn-helix HxlR type Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DQQ4_DESRL
helix-turn-helix HxlR type
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_6_25

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comp(25852..26733)
DNA (882bp) protein (294aa)
DegV family protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F059_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKL11480.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
degV family protein
PLM2_5_b1_sep16_scaffold_6_26
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26746..27267)
DNA (522bp) protein (174aa)
Carbonic anhydrase Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V3S4_9PSEU
Carbonic anhydrase {ECO:0000313|EMBL:EID54777.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora xinjiangensis XJ-54.;"
carbonic anhydrase
PLM2_5_b1_sep16_scaffold_6_27
unknown

Not on your lists

27306..27614
DNA (309bp) protein (103aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_6_28
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(27611..27928)
DNA (318bp) protein (106aa)
Regulatory protein ArsR Tax=Actinoplanes sp. N902-109 RepID=R4LSP6_9ACTO
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:AGL19996.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM2_5_b1_sep16_scaffold_6_29
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(27968..29860)
DNA (1893bp) protein (631aa)
Glycoside hydrolase 15-related protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F007_CONWI
glycoside hydrolase 15-like protein
Glycoside hydrolase 15-related protein {ECO:0000313|EMBL:ADB49983.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_6_30
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

29928..30824
DNA (897bp) protein (299aa)
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F344_CONWI
cytochrome C oxidase caa3-type, assembly factor CtaG-related protein
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying items 1-30 of 202 in total

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