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PLM2_5_b1_sep16_scaffold_9_26

Organism: PLM2_5_b1_sep16_Actinobacteria_Rubrobacteridae_69_19

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: 26898..27275

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi RIVM700367.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 125.0
  • Bit_score: 161
  • Evalue 4.40e-37
Ribonuclease VapC Tax=Mycobacterium canettii CIPT 140070010 RepID=L0QLX5_9MYCO similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 125.0
  • Bit_score: 162
  • Evalue 1.40e-37
vapC19; Conserved protein of unknown function with PIN domain, possible toxin VapC19 similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 125.0
  • Bit_score: 162
  • Evalue 4.00e-38

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Taxonomy

Mycobacterium xenopi → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 378
GTGAAGCTGCTCGATACGAGCGTTGCGATCGACCATCTCCGAGGTTCCCCGGATGCGGTCGAGCTGTTGAGCGGCCTGATCGAGGCCGAGGAGCTTCTCCTCGCAAGCGAGGTAGTCCGCTTCGAGCTCCTGGCCGGTGTCCGTAAAGGCGAGGTCGAGGCGCTGGAGCAGTTCTTCTCCGCCTTGTCGTGGGCCCCCGTCGGCGAGGAGGTAGCGCGCACCGCTGGCGCGCTTGCCCAACGCCATCGCCGTTCCCACAGCGGCATAGACGACGCCGACTACCTGATCGCCGCCACCTCGCTCCTGCTCGAGGCCGACCTGCTCACCACGAACGTGCGCCACTTCCCGATGATTCGCGGGCTCGAGCCGGCTTACTGA
PROTEIN sequence
Length: 126
VKLLDTSVAIDHLRGSPDAVELLSGLIEAEELLLASEVVRFELLAGVRKGEVEALEQFFSALSWAPVGEEVARTAGALAQRHRRSHSGIDDADYLIAATSLLLEADLLTTNVRHFPMIRGLEPAY*